<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <parent>
        <artifactId>smsd</artifactId>
        <groupId>uk.ac.ebi.smsd</groupId>
        <version>2.0.0</version>
    </parent>
    <modelVersion>4.0.0</modelVersion>

    <name>smsd-exec</name>
    <artifactId>smsd-exec</artifactId>
    <version>2.0.0</version>

    <dependencies>
        <dependency>
            <groupId>uk.ac.ebi.smsd</groupId>
            <artifactId>smsd-core</artifactId>
            <version>${project.version}</version>
        </dependency>
        <!-- http://mvnrepository.com/artifact/commons-cli/commons-cli -->
        <dependency>
            <groupId>commons-cli</groupId>
            <artifactId>commons-cli</artifactId>
            <version>1.3.1</version>
        </dependency>
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
            <version>4.11</version>
            <scope>test</scope>
        </dependency>
        <dependency>
            <groupId>org.openscience.cdk</groupId>
            <artifactId>cdk-bundle</artifactId>
            <version>1.5.13</version>
        </dependency>
    </dependencies>

    <build>
        <plugins>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-shade-plugin</artifactId>
                <version>2.4.3</version>
                <configuration>
                    <finalName>smsd</finalName>
                    <transformers>
                        <transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
                            <mainClass>uk.ac.ebi.smsd.gui.SMSDFrame</mainClass>
                        </transformer>
                        <transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
                    </transformers>
                </configuration>
                <executions>
                    <execution>
                        <phase>package</phase>
                        <goals>
                            <goal>shade</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-jar-plugin</artifactId>
                <version>2.4</version>
                <configuration>
                    <archive>
                        <manifest>
                            <addClasspath>true</addClasspath>
                            <mainClass>com.domain.package.Main</mainClass>
                            <classpathPrefix>dependency-jars/</classpathPrefix>
                        </manifest>
                    </archive>
                </configuration>
            </plugin>
        </plugins>
    </build>
    <profiles>
        <profile>
            <id>disable-java8-doclint</id>
            <activation>
                <jdk>[1.8,)</jdk>
            </activation>
            <properties>
                <additionalparam>-Xdoclint:none</additionalparam>
            </properties>
        </profile>
    </profiles>
</project>
