<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <parent>
        <groupId>uk.ac.ebi.ddi.maven</groupId>
        <artifactId>ddi-base-master</artifactId>
        <version>1.1</version>
    </parent>

    <groupId>uk.ac.ebi.ddi</groupId>
    <artifactId>ddi-validator</artifactId>
    <url>https://github.com/OmicsDI/xml-validator</url>

    <version>1.0</version>

    <properties>
        <assembly.dir>${project.name}-${project.version}</assembly.dir>
    </properties>

    <dependencies>
        <dependency>
            <groupId>psidev.psi.tools</groupId>
            <artifactId>xxindex</artifactId>
            <version>0.11</version>
        </dependency>
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
            <scope>test</scope>
        </dependency>
        <!-- logging dependencies -->
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-api</artifactId>
        </dependency>
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>jcl-over-slf4j</artifactId>
        </dependency>
        <dependency>
            <groupId>uk.ac.ebi.ddi</groupId>
            <artifactId>ddi-domain-db</artifactId>
            <version>1.0</version>
        </dependency>
        <dependency>
            <groupId>ch.qos.logback</groupId>
            <artifactId>logback-core</artifactId>
        </dependency>
        <dependency>
            <groupId>ch.qos.logback</groupId>
            <artifactId>logback-classic</artifactId>
        </dependency>
        <dependency>
            <groupId>it.unimi.dsi</groupId>
            <artifactId>fastutil</artifactId>
        </dependency>
        <dependency>
            <groupId>org.codehaus.woodstox</groupId>
            <artifactId>woodstox-core-asl</artifactId>
        </dependency>
        <dependency>
            <groupId>commons-cli</groupId>
            <artifactId>commons-cli</artifactId>
        </dependency>
        <dependency>
            <groupId>com.sun.xml.bind</groupId>
            <artifactId>jaxb-xjc</artifactId>
        </dependency>
    </dependencies>

    <build>
        <plugins>
            <plugin>
                <!-- you can use this plugin to generate the jaxb object model from the
                    schema and binding files specified below. Note: this will need an explicit
                    maven goal call, since it is not intergrated into the standard mvn lifecycle.
                    The goal to use is: org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:0.7.3:generate
                    NOTE: the code generation may overwrite existing classes, so care should
                    be taken with files that were manually modified. -->
                <groupId>org.jvnet.jaxb2.maven2</groupId>
                <artifactId>maven-jaxb2-plugin</artifactId>
                <version>0.12.3</version>
                <configuration>
                    <extension>true</extension>
                    <schemaDirectory>src/main/resources</schemaDirectory>
                    <schemaIncludes>
                        <include>omicsdi.xsd</include>
                    </schemaIncludes>
                    <bindingDirectory>src/main/resources</bindingDirectory>
                    <bindingIncludes>
                        <include>omicsdi-bindings.xjb</include>
                    </bindingIncludes>
                    <!-- NOTE THAT SOURCE IS GENERATED IN A DISTINCT FOLDER -->
                    <!-- TO AVOID LOSING CUSTOMIZATIONS IN EXISTING SOURCE -->
                    <generateDirectory>src/main/java</generateDirectory>
                    <removeOldOutput>false</removeOldOutput>
                    <forceRegenerate>true</forceRegenerate>
                    <verbose>true</verbose>
                    <args>
                        <arg>-no-header</arg>
                    </args>
                </configuration>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-dependency-plugin</artifactId>
                <version>2.10</version>
                <executions>
                    <execution>
                        <id>copy-dependencies</id>
                        <phase>package</phase>
                        <goals>
                            <goal>copy-dependencies</goal>
                        </goals>
                        <configuration>
                            <outputDirectory>${project.build.directory}/lib</outputDirectory>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-jar-plugin</artifactId>
                <version>2.4</version>
                <configuration>
                    <finalName>validatorCLI</finalName>
                    <excludes>
                        <exclude>**/test</exclude>
                        <exclude>**/test/*.class</exclude>
                    </excludes>
                    <archive>
                        <manifest>
                            <!--provide a CLI for omicsDDI-->
                            <mainClass>uk.ac.ebi.ddi.xml.validator.cli.validatorCLI</mainClass>
                            <addClasspath>true</addClasspath>
                            <classpathPrefix>lib</classpathPrefix>
                        </manifest>
                    </archive>
                </configuration>
                <executions>
                    <execution>
                        <goals>
                            <goal>jar</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-assembly-plugin</artifactId>
                <version>2.4</version>
                <configuration>
                    <descriptors>
                        <descriptor>${project.basedir}/assembly.xml</descriptor>
                    </descriptors>
                </configuration>
                <executions>
                    <execution>
                        <id>assembly</id>
                        <phase>package</phase>
                        <goals>
                            <goal>single</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-compiler-plugin</artifactId>
                <version>${maven.compiler.plugin}</version>
                <configuration>
                    <source>1.7</source>
                    <target>1.7</target>
                </configuration>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-release-plugin</artifactId>
                <version>2.5</version>
                <configuration>
                    <remoteTagging>true</remoteTagging>
                    <goals>deploy</goals>
                </configuration>
            </plugin>
        </plugins>
    </build>

    <repositories>
        <repository>
            <id>nexus-ebi-repo</id>
            <name>The EBI internal repository</name>
            <url>http://www.ebi.ac.uk/intact/maven/nexus/content/repositories/ebi-repo/</url>
            <releases>
            </releases>
            <snapshots>
                <enabled>false</enabled>
            </snapshots>
        </repository>
    </repositories>

    <!--scm git config-->
    <scm>
        <connection>scm:git:github.com/OmicsDI/xml-validator.git</connection>
        <developerConnection>scm:git:git@github.com:OmicsDI/xml-validator.git</developerConnection>
        <url>https://github.com/OmicsDI/xml-validator.git</url>
        <tag>ddi-validator-1.0</tag>
    </scm>


</project>