pro.parseq.vcf.exceptions

Class InvalidVcfFileException

java.lang.Object

java.lang.Throwable

java.lang.Exception

pro.parseq.vcf.exceptions.InvalidVcfFileException

All Implemented Interfaces:

Serializable

public class InvalidVcfFileException
extends Exception

Represents inconsistency with variant call format (VCF) specification

Author:

Alexander Afanasyev aafanasyev@parseq.pro

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
InvalidVcfFileException(int line, String message)
InvalidVcfFileException(String message)

Method Summary

Modifier and Type	Method and Description
int	getLine()
void	setLine(int line)

Methods inherited from class java.lang.Throwable

addSuppressed, fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, getSuppressed, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

InvalidVcfFileException

public InvalidVcfFileException(String message)

InvalidVcfFileException

public InvalidVcfFileException(int line,
                               String message)

Method Detail

getLine

public int getLine()

setLine

public void setLine(int line)