Hierarchy For All Packages

Package Hierarchies:

• pro.parseq.vcf,
• pro.parseq.vcf.exceptions,
• pro.parseq.vcf.fields,
• pro.parseq.vcf.fields.types,
• pro.parseq.vcf.types,
• pro.parseq.vcf.utils,
• pro.parseq.vcf.validators

Class Hierarchy

• java.lang.Object
  • pro.parseq.vcf.utils.InputStreamVcfReader (implements pro.parseq.vcf.utils.VcfReader)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • pro.parseq.vcf.exceptions.InvalidVcfFileException
  • pro.parseq.vcf.utils.Validatable
  • pro.parseq.vcf.types.Variant
  • pro.parseq.vcf.VcfExplorer
  • pro.parseq.vcf.types.VcfFile
  • pro.parseq.vcf.utils.VcfGrammar
  • pro.parseq.vcf.types.VcfLine
    • pro.parseq.vcf.types.DataLine
    • pro.parseq.vcf.types.Header
    • pro.parseq.vcf.types.Metadata
      • pro.parseq.vcf.fields.Filter
      • pro.parseq.vcf.fields.Format
      • pro.parseq.vcf.fields.Information
  • pro.parseq.vcf.utils.VcfParserImpl (implements pro.parseq.vcf.utils.VcfParser)

Interface Hierarchy

• pro.parseq.vcf.validators.LineValidator
• pro.parseq.vcf.utils.VcfParser
• pro.parseq.vcf.utils.VcfReader
• pro.parseq.vcf.utils.VcfValidator<T>

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • pro.parseq.vcf.fields.types.InfoFieldType
    • pro.parseq.vcf.fields.types.Genotype
    • pro.parseq.vcf.fields.types.FormatFieldType
    • pro.parseq.vcf.utils.FaultTolerance