Package org.rcsb.cif.model.generated

Class StructSiteView

  • All Implemented Interfaces:
    Category
    @Generated("org.rcsb.cif.generator.SchemaGenerator")
public class StructSiteView
extends BaseCategory
    Data items in the STRUCT_SITE_VIEW category record details about how to draw and annotate an informative view of the site.

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      StrColumn getDetails()
      A description of special aspects of this view of the site.
      StrColumn getId()
      The value of _struct_site_view.id must uniquely identify a record in the STRUCT_SITE_VIEW list.
      FloatColumn getRotMatrix11()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix12()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix13()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix21()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix22()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix23()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix31()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix32()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site.
      FloatColumn getRotMatrix33()
      The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category an orientation useful for visualizing the site.
      StrColumn getSiteId()
      This data item is a pointer to _struct_site.id in the STRUCT_SITE category.

    • Constructor Detail

      • StructSiteView

        public StructSiteView​(String name,
                      int rowCount,
                      Object[] encodedColumns)

      • StructSiteView

        public StructSiteView​(String name)

    • Method Detail

      • getDetails

        public StrColumn getDetails()
        A description of special aspects of this view of the site. This data item can be used as a figure legend.
        Returns:
        StrColumn

      • getId

        public StrColumn getId()
        The value of _struct_site_view.id must uniquely identify a record in the STRUCT_SITE_VIEW list. Note that this item need not be a number; it can be any unique identifier.
        Returns:
        StrColumn

      • getRotMatrix11

        public FloatColumn getRotMatrix11()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix12

        public FloatColumn getRotMatrix12()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix13

        public FloatColumn getRotMatrix13()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix21

        public FloatColumn getRotMatrix21()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix22

        public FloatColumn getRotMatrix22()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix23

        public FloatColumn getRotMatrix23()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix31

        public FloatColumn getRotMatrix31()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix32

        public FloatColumn getRotMatrix32()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category to an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getRotMatrix33

        public FloatColumn getRotMatrix33()
        The elements of the matrix used to rotate the subset of the Cartesian coordinates in the ATOM_SITE category identified in the STRUCT_SITE_GEN category an orientation useful for visualizing the site. The conventions used in the rotation are described in _struct_site_view.details. |x'| |11 12 13| |x| |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~ |z'| |31 32 33| |z|
        Returns:
        FloatColumn

      • getSiteId

        public StrColumn getSiteId()
        This data item is a pointer to _struct_site.id in the STRUCT_SITE category.
        Returns:
        StrColumn