Package org.rcsb.cif.model.generated
Class StructSheetTopology
- java.lang.Object
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- org.rcsb.cif.model.BaseCategory
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- org.rcsb.cif.model.generated.StructSheetTopology
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- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.generator.SchemaGenerator") public class StructSheetTopology extends BaseCategory
Data items in the STRUCT_SHEET_TOPOLOGY category record details about the topology of the residue ranges that form a beta-sheet. All topology links are pairwise and the specified pairs are assumed to be successive in the amino-acid sequence. These data items are useful in describing various simple and complex folds, but they become inadequate when the strands in the sheet come from more than one chain. The STRUCT_SHEET_ORDER data items can be used to describe single- and multiple-chain-containing sheets.
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Field Summary
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Fields inherited from class org.rcsb.cif.model.BaseCategory
isText, textFields
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Constructor Summary
Constructors Constructor Description StructSheetTopology(String name)StructSheetTopology(String name, int rowCount, Object[] encodedColumns)StructSheetTopology(String name, Map<String,Column> columns)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description IntColumngetOffset()Designates the relative position in the sheet, plus or minus, of the second residue range to the first.StrColumngetRangeId1()This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.StrColumngetRangeId2()This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.StrColumngetSense()A flag to indicate whether the two designated residue ranges are parallel or antiparallel to one another.StrColumngetSheetId()This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.-
Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get
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Method Detail
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getOffset
public IntColumn getOffset()
Designates the relative position in the sheet, plus or minus, of the second residue range to the first.- Returns:
- IntColumn
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getRangeId1
public StrColumn getRangeId1()
This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.- Returns:
- StrColumn
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getRangeId2
public StrColumn getRangeId2()
This data item is a pointer to _struct_sheet_range.id in the STRUCT_SHEET_RANGE category.- Returns:
- StrColumn
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getSense
public StrColumn getSense()
A flag to indicate whether the two designated residue ranges are parallel or antiparallel to one another.- Returns:
- StrColumn
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getSheetId
public StrColumn getSheetId()
This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.- Returns:
- StrColumn
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