Package org.rcsb.cif.model.generated
Class StructSheetRange
- java.lang.Object
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- org.rcsb.cif.model.BaseCategory
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- org.rcsb.cif.model.generated.StructSheetRange
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- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.generator.SchemaGenerator") public class StructSheetRange extends BaseCategory
Data items in the STRUCT_SHEET_RANGE category record details about the residue ranges that form a beta-sheet. Residues are included in a range if they made beta-sheet-type hydrogen-bonding interactions with at least one adjacent strand and if there are at least two residues in the range.
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Field Summary
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Fields inherited from class org.rcsb.cif.model.BaseCategory
isText, textFields
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Constructor Summary
Constructors Constructor Description StructSheetRange(String name)StructSheetRange(String name, int rowCount, Object[] encodedColumns)StructSheetRange(String name, Map<String,Column> columns)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description StrColumngetBegAuthAsymId()A component of the identifier for the residue at which the beta-sheet range begins.StrColumngetBegAuthCompId()A component of the identifier for the residue at which the beta-sheet range begins.IntColumngetBegAuthSeqId()A component of the identifier for the residue at which the beta-sheet range begins.StrColumngetBegLabelAsymId()A component of the identifier for the residue at which the beta-sheet range begins.StrColumngetBegLabelCompId()A component of the identifier for the residue at which the beta-sheet range begins.IntColumngetBegLabelSeqId()A component of the identifier for the residue at which the beta-sheet range begins.StrColumngetEndAuthAsymId()A component of the identifier for the residue at which the beta-sheet range ends.StrColumngetEndAuthCompId()A component of the identifier for the residue at which the beta-sheet range ends.IntColumngetEndAuthSeqId()A component of the identifier for the residue at which the beta-sheet range ends.StrColumngetEndLabelAsymId()A component of the identifier for the residue at which the beta-sheet range ends.StrColumngetEndLabelCompId()A component of the identifier for the residue at which the beta-sheet range ends.IntColumngetEndLabelSeqId()A component of the identifier for the residue at which the beta-sheet range ends.StrColumngetId()The value of _struct_sheet_range.id must uniquely identify a range in a given sheet in the STRUCT_SHEET_RANGE list.StrColumngetPdbxBegPDBInsCode()A component of the identifier for the residue at which the beta sheet range begins.StrColumngetPdbxEndPDBInsCode()A component of the identifier for the residue at which the beta sheet range ends.StrColumngetSheetId()This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.StrColumngetSymmetry()Describes the symmetry operation that should be applied to the residues delimited by the start and end designators in order to generate the appropriate strand in this sheet.-
Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get
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Method Detail
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getBegLabelAsymId
public StrColumn getBegLabelAsymId()
A component of the identifier for the residue at which the beta-sheet range begins. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.- Returns:
- StrColumn
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getBegLabelCompId
public StrColumn getBegLabelCompId()
A component of the identifier for the residue at which the beta-sheet range begins. This data item is a pointer to _chem_comp.id in the CHEM_COMP category.- Returns:
- StrColumn
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getBegLabelSeqId
public IntColumn getBegLabelSeqId()
A component of the identifier for the residue at which the beta-sheet range begins. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getEndLabelAsymId
public StrColumn getEndLabelAsymId()
A component of the identifier for the residue at which the beta-sheet range ends. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.- Returns:
- StrColumn
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getEndLabelCompId
public StrColumn getEndLabelCompId()
A component of the identifier for the residue at which the beta-sheet range ends. This data item is a pointer to _chem_comp.id in the CHEM_COMP category.- Returns:
- StrColumn
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getEndLabelSeqId
public IntColumn getEndLabelSeqId()
A component of the identifier for the residue at which the beta-sheet range ends. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getBegAuthAsymId
public StrColumn getBegAuthAsymId()
A component of the identifier for the residue at which the beta-sheet range begins. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getBegAuthCompId
public StrColumn getBegAuthCompId()
A component of the identifier for the residue at which the beta-sheet range begins. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getBegAuthSeqId
public IntColumn getBegAuthSeqId()
A component of the identifier for the residue at which the beta-sheet range begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getEndAuthAsymId
public StrColumn getEndAuthAsymId()
A component of the identifier for the residue at which the beta-sheet range ends. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getEndAuthCompId
public StrColumn getEndAuthCompId()
A component of the identifier for the residue at which the beta-sheet range ends. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getEndAuthSeqId
public IntColumn getEndAuthSeqId()
A component of the identifier for the residue at which the beta-sheet range ends. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getId
public StrColumn getId()
The value of _struct_sheet_range.id must uniquely identify a range in a given sheet in the STRUCT_SHEET_RANGE list. Note that this item need not be a number; it can be any unique identifier.- Returns:
- StrColumn
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getSheetId
public StrColumn getSheetId()
This data item is a pointer to _struct_sheet.id in the STRUCT_SHEET category.- Returns:
- StrColumn
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getSymmetry
public StrColumn getSymmetry()
Describes the symmetry operation that should be applied to the residues delimited by the start and end designators in order to generate the appropriate strand in this sheet.- Returns:
- StrColumn
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getPdbxBegPDBInsCode
public StrColumn getPdbxBegPDBInsCode()
A component of the identifier for the residue at which the beta sheet range begins. Insertion code.- Returns:
- StrColumn
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getPdbxEndPDBInsCode
public StrColumn getPdbxEndPDBInsCode()
A component of the identifier for the residue at which the beta sheet range ends. Insertion code.- Returns:
- StrColumn
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