Class StructNcsDomLim

  • All Implemented Interfaces:
    Category

    @Generated("org.rcsb.cif.generator.SchemaGenerator")
    public class StructNcsDomLim
    extends BaseCategory
    Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry.
    • Constructor Detail

      • StructNcsDomLim

        public StructNcsDomLim​(String name,
                               int rowCount,
                               Object[] encodedColumns)
      • StructNcsDomLim

        public StructNcsDomLim​(String name)
    • Method Detail

      • getBegLabelAltId

        public StrColumn getBegLabelAltId()
        A component of the identifier for the monomer at which this segment of the domain begins.
        Returns:
        StrColumn
      • getBegLabelAsymId

        public StrColumn getBegLabelAsymId()
        A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
        Returns:
        StrColumn
      • getBegLabelCompId

        public StrColumn getBegLabelCompId()
        A component of the identifier for the monomer at which this segment of the domain begins.
        Returns:
        StrColumn
      • getBegLabelSeqId

        public IntColumn getBegLabelSeqId()
        A component of the identifier for the monomer at which this segment of the domain begins.
        Returns:
        IntColumn
      • getBegAuthAsymId

        public StrColumn getBegAuthAsymId()
        A component of the identifier for the monomer at which this segment of the domain begins.
        Returns:
        StrColumn
      • getBegAuthCompId

        public StrColumn getBegAuthCompId()
        A component of the identifier for the monomer at which this segment of the domain begins.
        Returns:
        StrColumn
      • getBegAuthSeqId

        public StrColumn getBegAuthSeqId()
        A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getDomId

        public StrColumn getDomId()
        This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.
        Returns:
        StrColumn
      • getEndLabelAltId

        public StrColumn getEndLabelAltId()
        A component of the identifier for the monomer at which this segment of the domain ends.
        Returns:
        StrColumn
      • getEndLabelAsymId

        public StrColumn getEndLabelAsymId()
        A component of the identifier for the monomer at which this segment of the domain ends. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.
        Returns:
        StrColumn
      • getEndLabelCompId

        public StrColumn getEndLabelCompId()
        A component of the identifier for the monomer at which this segment of the domain ends.
        Returns:
        StrColumn
      • getEndLabelSeqId

        public IntColumn getEndLabelSeqId()
        A component of the identifier for the monomer at which this segment of the domain ends.
        Returns:
        IntColumn
      • getEndAuthAsymId

        public StrColumn getEndAuthAsymId()
        A component of the identifier for the monomer at which this segment of the domain ends.
        Returns:
        StrColumn
      • getEndAuthCompId

        public StrColumn getEndAuthCompId()
        A component of the identifier for the monomer at which this segment of the domain ends.
        Returns:
        StrColumn
      • getEndAuthSeqId

        public StrColumn getEndAuthSeqId()
        A component of the identifier for the monomer at which this segment of the domain ends.
        Returns:
        StrColumn
      • getSelectionDetails

        public StrColumn getSelectionDetails()
        A text description of the selection of residues that correspond to this domain.
        Returns:
        StrColumn
      • getPdbxComponentId

        public IntColumn getPdbxComponentId()
        Record number of the NCS domain limit assignment.
        Returns:
        IntColumn
      • getPdbxRefineCode

        public FloatColumn getPdbxRefineCode()
        record the refinement code number (from CCP4.)
        Returns:
        FloatColumn
      • getPdbxEnsId

        public StrColumn getPdbxEnsId()
        This is a unique identifier for a collection NCS related domains. This references item '_struct_ncs_dom.pdbx_ens_id'.
        Returns:
        StrColumn