Package org.rcsb.cif.model.generated
Class StructNcsDomLim
- java.lang.Object
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- org.rcsb.cif.model.BaseCategory
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- org.rcsb.cif.model.generated.StructNcsDomLim
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- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.generator.SchemaGenerator") public class StructNcsDomLim extends BaseCategory
Data items in the STRUCT_NCS_DOM_LIM category identify the start and end points of polypeptide chain segments that form all or part of a domain in an ensemble of domains related by noncrystallographic symmetry.
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Field Summary
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Fields inherited from class org.rcsb.cif.model.BaseCategory
isText, textFields
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Constructor Summary
Constructors Constructor Description StructNcsDomLim(String name)StructNcsDomLim(String name, int rowCount, Object[] encodedColumns)StructNcsDomLim(String name, Map<String,Column> columns)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description StrColumngetBegAuthAsymId()A component of the identifier for the monomer at which this segment of the domain begins.StrColumngetBegAuthCompId()A component of the identifier for the monomer at which this segment of the domain begins.StrColumngetBegAuthSeqId()A component of the identifier for the monomer at which this segment of the domain begins.StrColumngetBegLabelAltId()A component of the identifier for the monomer at which this segment of the domain begins.StrColumngetBegLabelAsymId()A component of the identifier for the monomer at which this segment of the domain begins.StrColumngetBegLabelCompId()A component of the identifier for the monomer at which this segment of the domain begins.IntColumngetBegLabelSeqId()A component of the identifier for the monomer at which this segment of the domain begins.StrColumngetDomId()This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.StrColumngetEndAuthAsymId()A component of the identifier for the monomer at which this segment of the domain ends.StrColumngetEndAuthCompId()A component of the identifier for the monomer at which this segment of the domain ends.StrColumngetEndAuthSeqId()A component of the identifier for the monomer at which this segment of the domain ends.StrColumngetEndLabelAltId()A component of the identifier for the monomer at which this segment of the domain ends.StrColumngetEndLabelAsymId()A component of the identifier for the monomer at which this segment of the domain ends.StrColumngetEndLabelCompId()A component of the identifier for the monomer at which this segment of the domain ends.IntColumngetEndLabelSeqId()A component of the identifier for the monomer at which this segment of the domain ends.IntColumngetPdbxComponentId()Record number of the NCS domain limit assignment.StrColumngetPdbxEnsId()This is a unique identifier for a collection NCS related domains.FloatColumngetPdbxRefineCode()record the refinement code number (from CCP4.)StrColumngetSelectionDetails()A text description of the selection of residues that correspond to this domain.-
Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get
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Method Detail
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getBegLabelAltId
public StrColumn getBegLabelAltId()
A component of the identifier for the monomer at which this segment of the domain begins.- Returns:
- StrColumn
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getBegLabelAsymId
public StrColumn getBegLabelAsymId()
A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.- Returns:
- StrColumn
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getBegLabelCompId
public StrColumn getBegLabelCompId()
A component of the identifier for the monomer at which this segment of the domain begins.- Returns:
- StrColumn
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getBegLabelSeqId
public IntColumn getBegLabelSeqId()
A component of the identifier for the monomer at which this segment of the domain begins.- Returns:
- IntColumn
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getBegAuthAsymId
public StrColumn getBegAuthAsymId()
A component of the identifier for the monomer at which this segment of the domain begins.- Returns:
- StrColumn
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getBegAuthCompId
public StrColumn getBegAuthCompId()
A component of the identifier for the monomer at which this segment of the domain begins.- Returns:
- StrColumn
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getBegAuthSeqId
public StrColumn getBegAuthSeqId()
A component of the identifier for the monomer at which this segment of the domain begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.- Returns:
- StrColumn
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getDomId
public StrColumn getDomId()
This data item is a pointer to _struct_ncs_dom.id in the STRUCT_NCS_DOM category.- Returns:
- StrColumn
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getEndLabelAltId
public StrColumn getEndLabelAltId()
A component of the identifier for the monomer at which this segment of the domain ends.- Returns:
- StrColumn
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getEndLabelAsymId
public StrColumn getEndLabelAsymId()
A component of the identifier for the monomer at which this segment of the domain ends. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.- Returns:
- StrColumn
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getEndLabelCompId
public StrColumn getEndLabelCompId()
A component of the identifier for the monomer at which this segment of the domain ends.- Returns:
- StrColumn
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getEndLabelSeqId
public IntColumn getEndLabelSeqId()
A component of the identifier for the monomer at which this segment of the domain ends.- Returns:
- IntColumn
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getEndAuthAsymId
public StrColumn getEndAuthAsymId()
A component of the identifier for the monomer at which this segment of the domain ends.- Returns:
- StrColumn
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getEndAuthCompId
public StrColumn getEndAuthCompId()
A component of the identifier for the monomer at which this segment of the domain ends.- Returns:
- StrColumn
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getEndAuthSeqId
public StrColumn getEndAuthSeqId()
A component of the identifier for the monomer at which this segment of the domain ends.- Returns:
- StrColumn
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getSelectionDetails
public StrColumn getSelectionDetails()
A text description of the selection of residues that correspond to this domain.- Returns:
- StrColumn
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getPdbxComponentId
public IntColumn getPdbxComponentId()
Record number of the NCS domain limit assignment.- Returns:
- IntColumn
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getPdbxRefineCode
public FloatColumn getPdbxRefineCode()
record the refinement code number (from CCP4.)- Returns:
- FloatColumn
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getPdbxEnsId
public StrColumn getPdbxEnsId()
This is a unique identifier for a collection NCS related domains. This references item '_struct_ncs_dom.pdbx_ens_id'.- Returns:
- StrColumn
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