Class StructConf

  • All Implemented Interfaces:
    Category

    @Generated("org.rcsb.cif.generator.SchemaGenerator")
    public class StructConf
    extends BaseCategory
    Data items in the STRUCT_CONF category record details about the backbone conformation of a segment of polymer. Data items in the STRUCT_CONF_TYPE category define the criteria used to identify the backbone conformations.
    • Constructor Detail

      • StructConf

        public StructConf​(String name,
                          int rowCount,
                          Object[] encodedColumns)
      • StructConf

        public StructConf​(String name)
    • Method Detail

      • getBegLabelAsymId

        public StrColumn getBegLabelAsymId()
        A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getBegLabelCompId

        public StrColumn getBegLabelCompId()
        A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getBegLabelSeqId

        public IntColumn getBegLabelSeqId()
        A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getBegAuthAsymId

        public StrColumn getBegAuthAsymId()
        A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getBegAuthCompId

        public StrColumn getBegAuthCompId()
        A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getBegAuthSeqId

        public IntColumn getBegAuthSeqId()
        A component of the identifier for the residue at which the conformation segment begins. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getConfTypeId

        public StrColumn getConfTypeId()
        This data item is a pointer to _struct_conf_type.id in the STRUCT_CONF_TYPE category.
        Returns:
        StrColumn
      • getDetails

        public StrColumn getDetails()
        A description of special aspects of the conformation assignment.
        Returns:
        StrColumn
      • getEndLabelAsymId

        public StrColumn getEndLabelAsymId()
        A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getEndLabelCompId

        public StrColumn getEndLabelCompId()
        A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getEndLabelSeqId

        public IntColumn getEndLabelSeqId()
        A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getEndAuthAsymId

        public StrColumn getEndAuthAsymId()
        A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getEndAuthCompId

        public StrColumn getEndAuthCompId()
        A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getEndAuthSeqId

        public IntColumn getEndAuthSeqId()
        A component of the identifier for the residue at which the conformation segment ends. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getId

        public StrColumn getId()
        The value of _struct_conf.id must uniquely identify a record in the STRUCT_CONF list. Note that this item need not be a number; it can be any unique identifier.
        Returns:
        StrColumn
      • getPdbxBegPDBInsCode

        public StrColumn getPdbxBegPDBInsCode()
        A component of the identifier for the residue at which the conformation segment starts.
        Returns:
        StrColumn
      • getPdbxEndPDBInsCode

        public StrColumn getPdbxEndPDBInsCode()
        A component of the identifier for the residue at which the conformation segment ends.
        Returns:
        StrColumn
      • getPdbxPDBHelixClass

        public StrColumn getPdbxPDBHelixClass()
        This item is a place holder for the helix class used in the PDB HELIX record.
        Returns:
        StrColumn
      • getPdbxPDBHelixLength

        public IntColumn getPdbxPDBHelixLength()
        A placeholder for the lengths of the helix of the PDB HELIX record.
        Returns:
        IntColumn
      • getPdbxPDBHelixId

        public StrColumn getPdbxPDBHelixId()
        A placeholder for the helix identifier of the PDB HELIX record.
        Returns:
        StrColumn