Package org.rcsb.cif.model.generated

Class PhasingMADSet

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PhasingMADSet

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PhasingMADSet
extends BaseCategory

Data items in the PHASING_MAD_SET category record details about the individual data sets used in a MAD phasing experiment.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PhasingMADSet(String name)
PhasingMADSet(String name, int rowCount, Object[] encodedColumns)
PhasingMADSet(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getClustId()	This data item is a pointer to _phasing_MAD_clust.id in the PHASING_MAD_CLUST category.
FloatColumn	getDResHigh()	The lowest value for the interplanar spacings for the reflection data used for this set of data.
FloatColumn	getDResLow()	The highest value for the interplanar spacings for the reflection data used for this set of data.
StrColumn	getExptId()	This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.
FloatColumn	getFDoublePrime()	The f'' component of the anomalous scattering factor for this wavelength.
FloatColumn	getFPrime()	The f' component of the anomalous scattering factor for this wavelength.
StrColumn	getPdbxAtomType()	record the type of heavy atoms which produce anomolous singal.
FloatColumn	getPdbxFDoublePrimeRefined()	record the refined f_double_prime (not from experiment).
FloatColumn	getPdbxFPrimeRefined()	record the refined f_prime (not from experiment).
StrColumn	getSetId()	This data item is a pointer to _phasing_set.id in the PHASING_SET category.
FloatColumn	getWavelength()	The wavelength at which this data set was measured.
StrColumn	getWavelengthDetails()	A descriptor for this wavelength in this cluster of data sets.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PhasingMADSet

public PhasingMADSet(String name,
                     Map<String,Column> columns)

PhasingMADSet

public PhasingMADSet(String name,
                     int rowCount,
                     Object[] encodedColumns)

PhasingMADSet

public PhasingMADSet(String name)

Method Detail

getClustId

public StrColumn getClustId()

This data item is a pointer to _phasing_MAD_clust.id in the PHASING_MAD_CLUST category.

Returns:

StrColumn

getDResHigh

public FloatColumn getDResHigh()

The lowest value for the interplanar spacings for the reflection data used for this set of data. This is called the highest resolution.

Returns:

FloatColumn

getDResLow

public FloatColumn getDResLow()

The highest value for the interplanar spacings for the reflection data used for this set of data. This is called the lowest resolution.

Returns:

FloatColumn

getExptId

public StrColumn getExptId()

This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.

Returns:

StrColumn

getFDoublePrime

public FloatColumn getFDoublePrime()

The f'' component of the anomalous scattering factor for this wavelength.

Returns:

FloatColumn

getFPrime

public FloatColumn getFPrime()

The f' component of the anomalous scattering factor for this wavelength.

Returns:

FloatColumn

getSetId

public StrColumn getSetId()

This data item is a pointer to _phasing_set.id in the PHASING_SET category.

Returns:

StrColumn

getWavelength

public FloatColumn getWavelength()

The wavelength at which this data set was measured.

Returns:

FloatColumn

getWavelengthDetails

public StrColumn getWavelengthDetails()

A descriptor for this wavelength in this cluster of data sets.

Returns:

StrColumn

getPdbxAtomType

public StrColumn getPdbxAtomType()

record the type of heavy atoms which produce anomolous singal.

Returns:

StrColumn

getPdbxFPrimeRefined

public FloatColumn getPdbxFPrimeRefined()

record the refined f_prime (not from experiment).

Returns:

FloatColumn

getPdbxFDoublePrimeRefined

public FloatColumn getPdbxFDoublePrimeRefined()

record the refined f_double_prime (not from experiment).

Returns:

FloatColumn