Package org.rcsb.cif.model.generated

Class PhasingMADRatio

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PhasingMADRatio

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PhasingMADRatio
extends BaseCategory

Data items in the PHASING_MAD_RATIO category record the ratios of phasing statistics between pairs of data sets in a MAD phasing experiment, in given shells of resolution.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PhasingMADRatio(String name)
PhasingMADRatio(String name, int rowCount, Object[] encodedColumns)
PhasingMADRatio(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getClustId()	This data item is a pointer to _phasing_MAD_clust.id in the PHASING_MAD_CLUST category.
FloatColumn	getDResHigh()	The lowest value for the interplanar spacings for the reflection data used for the comparison of Bijvoet differences.
FloatColumn	getDResLow()	The highest value for the interplanar spacings for the reflection data used for the comparison of Bijvoet differences.
StrColumn	getExptId()	This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.
FloatColumn	getRatioOneWl()	The root-mean-square Bijvoet difference at one wavelength for all reflections.
FloatColumn	getRatioOneWlCentric()	The root-mean-square Bijvoet difference at one wavelength for centric reflections.
FloatColumn	getRatioTwoWl()	The root-mean-square dispersive Bijvoet difference between two wavelengths for all reflections.
FloatColumn	getWavelength1()	This data item is a pointer to _phasing_MAD_set.wavelength in the PHASING_MAD_SET category.
FloatColumn	getWavelength2()	This data item is a pointer to _phasing_MAD_set.wavelength in the PHASING_MAD_SET category.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PhasingMADRatio

public PhasingMADRatio(String name,
                       Map<String,Column> columns)

PhasingMADRatio

public PhasingMADRatio(String name,
                       int rowCount,
                       Object[] encodedColumns)

PhasingMADRatio

public PhasingMADRatio(String name)

Method Detail

getDResHigh

public FloatColumn getDResHigh()

The lowest value for the interplanar spacings for the reflection data used for the comparison of Bijvoet differences. This is called the highest resolution.

Returns:

FloatColumn

getDResLow

public FloatColumn getDResLow()

The highest value for the interplanar spacings for the reflection data used for the comparison of Bijvoet differences. This is called the lowest resolution.

Returns:

FloatColumn

getExptId

public StrColumn getExptId()

This data item is a pointer to _phasing_MAD_expt.id in the PHASING_MAD_EXPT category.

Returns:

StrColumn

getClustId

public StrColumn getClustId()

This data item is a pointer to _phasing_MAD_clust.id in the PHASING_MAD_CLUST category.

Returns:

StrColumn

getRatioOneWl

public FloatColumn getRatioOneWl()

The root-mean-square Bijvoet difference at one wavelength for all reflections.

Returns:

FloatColumn

getRatioOneWlCentric

public FloatColumn getRatioOneWlCentric()

The root-mean-square Bijvoet difference at one wavelength for centric reflections. This would be equal to zero for perfect data and thus serves as an estimate of the noise in the anomalous signals.

Returns:

FloatColumn

getRatioTwoWl

public FloatColumn getRatioTwoWl()

The root-mean-square dispersive Bijvoet difference between two wavelengths for all reflections.

Returns:

FloatColumn

getWavelength1

public FloatColumn getWavelength1()

This data item is a pointer to _phasing_MAD_set.wavelength in the PHASING_MAD_SET category.

Returns:

FloatColumn

getWavelength2

public FloatColumn getWavelength2()

This data item is a pointer to _phasing_MAD_set.wavelength in the PHASING_MAD_SET category.

Returns:

FloatColumn