Package org.rcsb.cif.model.generated
Class PdbxVirtualAngle
- java.lang.Object
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- org.rcsb.cif.model.BaseCategory
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- org.rcsb.cif.model.generated.PdbxVirtualAngle
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- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.generator.SchemaGenerator") public class PdbxVirtualAngle extends BaseCategory
Data items in the PDBX_VIRTUAL_ANGLE category record details about the molecular virtual angles, as calculated from the contents of the ATOM, CELL, and SYMMETRY data.
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Field Summary
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Fields inherited from class org.rcsb.cif.model.BaseCategory
isText, textFields
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Constructor Summary
Constructors Constructor Description PdbxVirtualAngle(String name)PdbxVirtualAngle(String name, int rowCount, Object[] encodedColumns)PdbxVirtualAngle(String name, Map<String,Column> columns)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description StrColumngetAtomSiteAuthAsymId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthAsymId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthAsymId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthAtomId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthAtomId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthAtomId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthCompId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthCompId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthCompId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthSeqId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthSeqId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteAuthSeqId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteId1()The identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteId2()The identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteId3()The identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAltId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAltId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAltId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAsymId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAsymId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAsymId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAtomId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAtomId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelAtomId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelCompId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelCompId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.StrColumngetAtomSiteLabelCompId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.IntColumngetAtomSiteLabelSeqId1()An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.IntColumngetAtomSiteLabelSeqId2()An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.IntColumngetAtomSiteLabelSeqId3()An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value.IntColumngetModelId()The model number for the given angleStrColumngetSiteSymmetry1()The symmetry code of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.StrColumngetSiteSymmetry2()The symmetry code of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.StrColumngetSiteSymmetry3()The symmetry code of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.FloatColumngetValue()Angle in degrees bounded by the three sites _pdbx_virtual_angle.atom_site_id_1, _pdbx_virtual_angle.atom_site_id_2 and _pdbx_virtual_angle.atom_site_id_3.FloatColumngetValueEsd()The estimated standard deviation of _pdbx_virtual_angle.value.-
Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get
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Method Detail
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getModelId
public IntColumn getModelId()
The model number for the given angle- Returns:
- IntColumn
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getAtomSiteId1
public StrColumn getAtomSiteId1()
The identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelAltId1
public StrColumn getAtomSiteLabelAltId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelAtomId1
public StrColumn getAtomSiteLabelAtomId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelCompId1
public StrColumn getAtomSiteLabelCompId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelSeqId1
public IntColumn getAtomSiteLabelSeqId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getAtomSiteLabelAsymId1
public StrColumn getAtomSiteLabelAsymId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteId2
public StrColumn getAtomSiteId2()
The identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. The second atom is taken to be the apex of the angle. This data item is a pointer to _atom_site.id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelAltId2
public StrColumn getAtomSiteLabelAltId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelAtomId2
public StrColumn getAtomSiteLabelAtomId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelCompId2
public StrColumn getAtomSiteLabelCompId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelSeqId2
public IntColumn getAtomSiteLabelSeqId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getAtomSiteLabelAsymId2
public StrColumn getAtomSiteLabelAsymId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteId3
public StrColumn getAtomSiteId3()
The identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelAltId3
public StrColumn getAtomSiteLabelAltId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelAtomId3
public StrColumn getAtomSiteLabelAtomId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelCompId3
public StrColumn getAtomSiteLabelCompId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteLabelSeqId3
public IntColumn getAtomSiteLabelSeqId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.- Returns:
- IntColumn
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getAtomSiteLabelAsymId3
public StrColumn getAtomSiteLabelAsymId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthAsymId1
public StrColumn getAtomSiteAuthAsymId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthAtomId1
public StrColumn getAtomSiteAuthAtomId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthCompId1
public StrColumn getAtomSiteAuthCompId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthSeqId1
public StrColumn getAtomSiteAuthSeqId1()
An optional identifier of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthAtomId2
public StrColumn getAtomSiteAuthAtomId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthAsymId2
public StrColumn getAtomSiteAuthAsymId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthCompId2
public StrColumn getAtomSiteAuthCompId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthSeqId2
public StrColumn getAtomSiteAuthSeqId2()
An optional identifier of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthAtomId3
public StrColumn getAtomSiteAuthAtomId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthAsymId3
public StrColumn getAtomSiteAuthAsymId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthCompId3
public StrColumn getAtomSiteAuthCompId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.- Returns:
- StrColumn
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getAtomSiteAuthSeqId3
public StrColumn getAtomSiteAuthSeqId3()
An optional identifier of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.value. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.- Returns:
- StrColumn
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getSiteSymmetry1
public StrColumn getSiteSymmetry1()
The symmetry code of the first of the three atom sites that define the angle specified by _pdbx_virtual_angle.- Returns:
- StrColumn
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getSiteSymmetry2
public StrColumn getSiteSymmetry2()
The symmetry code of the second of the three atom sites that define the angle specified by _pdbx_virtual_angle.- Returns:
- StrColumn
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getSiteSymmetry3
public StrColumn getSiteSymmetry3()
The symmetry code of the third of the three atom sites that define the angle specified by _pdbx_virtual_angle.- Returns:
- StrColumn
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getValue
public FloatColumn getValue()
Angle in degrees bounded by the three sites _pdbx_virtual_angle.atom_site_id_1, _pdbx_virtual_angle.atom_site_id_2 and _pdbx_virtual_angle.atom_site_id_3.- Returns:
- FloatColumn
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getValueEsd
public FloatColumn getValueEsd()
The estimated standard deviation of _pdbx_virtual_angle.value.- Returns:
- FloatColumn
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