java.lang.Object
- org.rcsb.cif.model.BaseCategory
- - org.rcsb.cif.model.generated.PdbxValBond

All Implemented Interfaces:

Category
```
@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxValBond
extends BaseCategory
```
The PDBX_VAL_BOND category lists the covalent bond angles in this entry deviating by greater than 6*sigma from standard values. This is a completely derived category. Do not edit.

Field Summary
- Fields inherited from class org.rcsb.cif.model.BaseCategory
  isText, textFields

Constructor Summary

Constructors
Constructor	Description
`PdbxValBond(String name)`
`PdbxValBond(String name, int rowCount, Object[] encodedColumns)`
`PdbxValBond(String name, Map<String,Column> columns)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`StrColumn`	`getAuthAsymId1()`	identifier of the first of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthAsymId2()`	identifier of the second of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthAtomId1()`	identifier of the first of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthAtomId2()`	identifier of the second of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthCompId1()`	identifier of the first of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthCompId2()`	identifier of the second of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthPDBInsertId1()`	Optional identifier of the first of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthPDBInsertId2()`	Optional identifier of the second of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthSeqId1()`	identifier of the first of the two atom sites that define the covalent bond.
`StrColumn`	`getAuthSeqId2()`	identifier of the second of the two atom sites that define the covalent bond.
`FloatColumn`	`getBond()`	The value of the bond distance deviating by more than 6*RMSD from the standard dictionary value.
`FloatColumn`	`getBondDeviation()`	The value of the deviation from ideal for the defined covalent bond for the two atoms defined.
`IntColumn`	`getId()`	The value of _pdbx_val_bond.id must uniquely identify each item in the PDBX_VAL_BOND list.
`StrColumn`	`getLabelAltId1()`	A component of the identifier for partner 1 of the bond connection.
`StrColumn`	`getLabelAltId2()`	A component of the identifier for partner 2 of the bond connection.
`StrColumn`	`getLabelAsymId1()`	A component of the identifier for partner 1 of the bond connection.
`StrColumn`	`getLabelAsymId2()`	A component of the identifier for partner 2 of the bond connection.
`StrColumn`	`getLabelAtomId1()`	A component of the identifier for partner 1 of the bond connection.
`StrColumn`	`getLabelAtomId2()`	A component of the identifier for partner 2 of the bond connection.
`StrColumn`	`getLabelCompId1()`	A component of the identifier for partner 1 of the bond connection.
`StrColumn`	`getLabelCompId2()`	A component of the identifier for partner 2 of the bond connection.
`IntColumn`	`getLabelSeqId1()`	A component of the identifier for partner 1 of the bond connection.
`IntColumn`	`getLabelSeqId2()`	A component of the identifier for partner 2 of the bond connection.
`IntColumn`	`getModelId()`	The model number for the given bond

Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get

- Constructor Detail
  - PdbxValBond
```
public PdbxValBond(String name,
                   Map<String,Column> columns)
```
  - PdbxValBond
```
public PdbxValBond(String name,
                   int rowCount,
                   Object[] encodedColumns)
```
  - PdbxValBond
```
public PdbxValBond(String name)
```
- Method Detail
  - getId
```
public IntColumn getId()
```
    The value of _pdbx_val_bond.id must uniquely identify each item in the PDBX_VAL_BOND list. This is an integer serial number.
    
    Returns:
    
    IntColumn
  - getModelId
```
public IntColumn getModelId()
```
    The model number for the given bond
    
    Returns:
    
    IntColumn
  - getAuthAsymId1
```
public StrColumn getAuthAsymId1()
```
    identifier of the first of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthAtomId1
```
public StrColumn getAuthAtomId1()
```
    identifier of the first of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthCompId1
```
public StrColumn getAuthCompId1()
```
    identifier of the first of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthSeqId1
```
public StrColumn getAuthSeqId1()
```
    identifier of the first of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthAtomId2
```
public StrColumn getAuthAtomId2()
```
    identifier of the second of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthAsymId2
```
public StrColumn getAuthAsymId2()
```
    identifier of the second of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthCompId2
```
public StrColumn getAuthCompId2()
```
    identifier of the second of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthSeqId2
```
public StrColumn getAuthSeqId2()
```
    identifier of the second of the two atom sites that define the covalent bond. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getAuthPDBInsertId1
```
public StrColumn getAuthPDBInsertId1()
```
    Optional identifier of the first of the two atom sites that define the covalent bond.
    
    Returns:
    
    StrColumn
  - getAuthPDBInsertId2
```
public StrColumn getAuthPDBInsertId2()
```
    Optional identifier of the second of the two atom sites that define the covalent bond.
    
    Returns:
    
    StrColumn
  - getLabelAltId1
```
public StrColumn getLabelAltId1()
```
    A component of the identifier for partner 1 of the bond connection.
    
    Returns:
    
    StrColumn
  - getLabelAsymId1
```
public StrColumn getLabelAsymId1()
```
    A component of the identifier for partner 1 of the bond connection. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getLabelAtomId1
```
public StrColumn getLabelAtomId1()
```
    A component of the identifier for partner 1 of the bond connection. This data item is a pointer to _chem_comp_atom.atom_id in the CHEM_COMP_ATOM category.
    
    Returns:
    
    StrColumn
  - getLabelCompId1
```
public StrColumn getLabelCompId1()
```
    A component of the identifier for partner 1 of the bond connection. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getLabelSeqId1
```
public IntColumn getLabelSeqId1()
```
    A component of the identifier for partner 1 of the bond connection. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
    
    Returns:
    
    IntColumn
  - getLabelAltId2
```
public StrColumn getLabelAltId2()
```
    A component of the identifier for partner 2 of the bond connection.
    
    Returns:
    
    StrColumn
  - getLabelAsymId2
```
public StrColumn getLabelAsymId2()
```
    A component of the identifier for partner 2 of the bond connection. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getLabelAtomId2
```
public StrColumn getLabelAtomId2()
```
    A component of the identifier for partner 2 of the bond connection. This data item is a pointer to _chem_comp_atom.atom_id in the CHEM_COMP_ATOM category.
    
    Returns:
    
    StrColumn
  - getLabelCompId2
```
public StrColumn getLabelCompId2()
```
    A component of the identifier for partner 2 of the bond connection. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
    
    Returns:
    
    StrColumn
  - getLabelSeqId2
```
public IntColumn getLabelSeqId2()
```
    A component of the identifier for partner 2 of the bond connection. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
    
    Returns:
    
    IntColumn
  - getBond
```
public FloatColumn getBond()
```
    The value of the bond distance deviating by more than 6*RMSD from the standard dictionary value.
    
    Returns:
    
    FloatColumn
  - getBondDeviation
```
public FloatColumn getBondDeviation()
```
    The value of the deviation from ideal for the defined covalent bond for the two atoms defined.
    
    Returns:
    
    FloatColumn

Class PdbxValBond

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

Constructor Summary

Method Summary

Methods inherited from class org.rcsb.cif.model.BaseCategory

Methods inherited from class java.lang.Object

Methods inherited from interface org.rcsb.cif.model.Category

Constructor Detail

PdbxValBond

PdbxValBond

PdbxValBond

Method Detail

getId

getModelId

getAuthAsymId1

getAuthAtomId1

getAuthCompId1

getAuthSeqId1

getAuthAtomId2

getAuthAsymId2

getAuthCompId2

getAuthSeqId2

getAuthPDBInsertId1

getAuthPDBInsertId2

getLabelAltId1

getLabelAsymId1

getLabelAtomId1

getLabelCompId1

getLabelSeqId1

getLabelAltId2

getLabelAsymId2

getLabelAtomId2

getLabelCompId2

getLabelSeqId2

getBond

getBondDeviation