Package org.rcsb.cif.model.generated

Class PdbxUnobsOrZeroOccAtoms

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxUnobsOrZeroOccAtoms

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxUnobsOrZeroOccAtoms
extends BaseCategory

Data items in the PDBX_UNOBS_OR_ZERO_OCC_ATOMS category list the atoms within the entry that are either unobserved or have zero occupancy/

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxUnobsOrZeroOccAtoms(String name)
PdbxUnobsOrZeroOccAtoms(String name, int rowCount, Object[] encodedColumns)
PdbxUnobsOrZeroOccAtoms(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAuthAsymId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getAuthAtomId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getAuthCompId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getAuthSeqId()	Part of the identifier for the unobserved or zero occupancy atom.
IntColumn	getId()	The value of _pdbx_unobs_or_zero_occ_atoms.id must uniquely identify each item in the PDBX_UNOBS_OR_ZERO_OCC_ATOMS list.
StrColumn	getLabelAltId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getLabelAsymId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getLabelAtomId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getLabelCompId()	Part of the identifier for the unobserved or zero occupancy atom.
IntColumn	getLabelSeqId()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getOccupancyFlag()	The value of occupancy flag indicates whether the atom is either unobserved (=1) or has zero occupancy (=0)
StrColumn	getPDBInsCode()	Part of the identifier for the unobserved or zero occupancy atom.
IntColumn	getPDBModelNum()	Part of the identifier for the unobserved or zero occupancy atom.
StrColumn	getPolymerFlag()	The value of polymer flag indicates whether the unobserved or zero occupancy atom is part of a polymer chain

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxUnobsOrZeroOccAtoms

public PdbxUnobsOrZeroOccAtoms(String name,
                               Map<String,Column> columns)

PdbxUnobsOrZeroOccAtoms

public PdbxUnobsOrZeroOccAtoms(String name,
                               int rowCount,
                               Object[] encodedColumns)

PdbxUnobsOrZeroOccAtoms

public PdbxUnobsOrZeroOccAtoms(String name)

Method Detail

getId

public IntColumn getId()

The value of _pdbx_unobs_or_zero_occ_atoms.id must uniquely identify each item in the PDBX_UNOBS_OR_ZERO_OCC_ATOMS list. This is an integer serial number.

Returns:

IntColumn

getPolymerFlag

public StrColumn getPolymerFlag()

The value of polymer flag indicates whether the unobserved or zero occupancy atom is part of a polymer chain

Returns:

StrColumn

getOccupancyFlag

public StrColumn getOccupancyFlag()

The value of occupancy flag indicates whether the atom is either unobserved (=1) or has zero occupancy (=0)

Returns:

StrColumn

getPDBModelNum

public IntColumn getPDBModelNum()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.pdbx_PDB_model_num in the ATOM_SITE category.

Returns:

IntColumn

getAuthAsymId

public StrColumn getAuthAsymId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthAtomId

public StrColumn getAuthAtomId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthCompId

public StrColumn getAuthCompId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthSeqId

public StrColumn getAuthSeqId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

Returns:

StrColumn

getPDBInsCode

public StrColumn getPDBInsCode()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

Returns:

StrColumn

getLabelAltId

public StrColumn getLabelAltId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.label_alt.id in the ATOM_SITE category.

Returns:

StrColumn

getLabelAtomId

public StrColumn getLabelAtomId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelAsymId

public StrColumn getLabelAsymId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelCompId

public StrColumn getLabelCompId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelSeqId

public IntColumn getLabelSeqId()

Part of the identifier for the unobserved or zero occupancy atom. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

Returns:

IntColumn