Package org.rcsb.cif.model.generated

Class PdbxStructRefSeqFeatureProp

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxStructRefSeqFeatureProp

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxStructRefSeqFeatureProp
extends BaseCategory

Data items in the PDBX_STRUCT_REF_SEQ_FEATURE_PROP category provide a mechanism for identifying and annotating properties of sequence features.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxStructRefSeqFeatureProp(String name)
PdbxStructRefSeqFeatureProp(String name, int rowCount, Object[] encodedColumns)
PdbxStructRefSeqFeatureProp(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getBegDbMonId()	The begining monomer type found at the starting position in the referenced database entry.
IntColumn	getBegDbSeqId()	The begining monomer sequence position in the referenced database entry.
StrColumn	getDetails()	A description of special aspects of the property value pair.
StrColumn	getEndDbMonId()	The terminal monomer type found at the ending position in the referenced database entry.
IntColumn	getEndDbSeqId()	The terminal monomer sequence position in the referenced database entry.
IntColumn	getFeatureId()	This data item is a pointer to _pdbx_struct_ref_seq_feature.feature_id in the STRUCT_REF_SEQ_FEATURE category.
IntColumn	getPropertyId()	This uniquely identifies the a property of a sequence feature in the STRUCT_REF_SEQ_FEATURE_PROPx category.
StrColumn	getType()	Property type.
StrColumn	getValue()	Property value.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxStructRefSeqFeatureProp

public PdbxStructRefSeqFeatureProp(String name,
                                   Map<String,Column> columns)

PdbxStructRefSeqFeatureProp

public PdbxStructRefSeqFeatureProp(String name,
                                   int rowCount,
                                   Object[] encodedColumns)

PdbxStructRefSeqFeatureProp

public PdbxStructRefSeqFeatureProp(String name)

Method Detail

getFeatureId

public IntColumn getFeatureId()

This data item is a pointer to _pdbx_struct_ref_seq_feature.feature_id in the STRUCT_REF_SEQ_FEATURE category.

Returns:

IntColumn

getPropertyId

public IntColumn getPropertyId()

This uniquely identifies the a property of a sequence feature in the STRUCT_REF_SEQ_FEATURE_PROPx category.

Returns:

IntColumn

getType

public StrColumn getType()

Property type.

Returns:

StrColumn

getValue

public StrColumn getValue()

Property value.

Returns:

StrColumn

getDetails

public StrColumn getDetails()

A description of special aspects of the property value pair.

Returns:

StrColumn

getBegDbMonId

public StrColumn getBegDbMonId()

The begining monomer type found at the starting position in the referenced database entry. This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

Returns:

StrColumn

getEndDbMonId

public StrColumn getEndDbMonId()

The terminal monomer type found at the ending position in the referenced database entry. This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

Returns:

StrColumn

getBegDbSeqId

public IntColumn getBegDbSeqId()

The begining monomer sequence position in the referenced database entry.

Returns:

IntColumn

getEndDbSeqId

public IntColumn getEndDbSeqId()

The terminal monomer sequence position in the referenced database entry.

Returns:

IntColumn