Package org.rcsb.cif.model.generated

Class PdbxStructGroupList

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxStructGroupList

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxStructGroupList
extends BaseCategory

Data items in the PDBX_STRUCT_GROUP_LIST define groups of related components or atoms.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxStructGroupList(String name)
PdbxStructGroupList(String name, int rowCount, Object[] encodedColumns)
PdbxStructGroupList(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getDescription()	The description of the group.
StrColumn	getGroupEnumerationType()	The manner in which the group is defined.
StrColumn	getName()	The name of the group.
StrColumn	getSelection()	A qualification of the subset of atoms in the group.
StrColumn	getSelectionDetails()	A text description of subset of the atom selection in the group.
StrColumn	getStructGroupId()	The unique identifier for the group.
StrColumn	getType()	A selected list of group types.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxStructGroupList

public PdbxStructGroupList(String name,
                           Map<String,Column> columns)

PdbxStructGroupList

public PdbxStructGroupList(String name,
                           int rowCount,
                           Object[] encodedColumns)

PdbxStructGroupList

public PdbxStructGroupList(String name)

Method Detail

getStructGroupId

public StrColumn getStructGroupId()

The unique identifier for the group.

Returns:

StrColumn

getName

public StrColumn getName()

The name of the group.

Returns:

StrColumn

getType

public StrColumn getType()

A selected list of group types.

Returns:

StrColumn

getGroupEnumerationType

public StrColumn getGroupEnumerationType()

The manner in which the group is defined. Groups consist of collections within the set of deposited coordinates which can be defined in terms of a list of chemical components in category PDBX_STRUCT_GROUP_COMPONENTS, ranges of chemical components in PDBX_STRUCT_GROUP_COMPONENT_RANGE, or as individual atoms using _atom_site.pdbx_group_id. Groups can be composed of selections from multiple categories in which case the enumeration types are separated by commas.

Returns:

StrColumn

getDescription

public StrColumn getDescription()

The description of the group.

Returns:

StrColumn

getSelection

public StrColumn getSelection()

A qualification of the subset of atoms in the group.

Returns:

StrColumn

getSelectionDetails

public StrColumn getSelectionDetails()

A text description of subset of the atom selection in the group.

Returns:

StrColumn