Class PdbxStructConnAngle

  • All Implemented Interfaces:
    Category

    @Generated("org.rcsb.cif.generator.SchemaGenerator")
    public class PdbxStructConnAngle
    extends BaseCategory
    Data items in the PDBX_STRUCT_CONN_ANGLE category record the angles in connections between portions of the structure.
    • Constructor Detail

      • PdbxStructConnAngle

        public PdbxStructConnAngle​(String name,
                                   int rowCount,
                                   Object[] encodedColumns)
      • PdbxStructConnAngle

        public PdbxStructConnAngle​(String name)
    • Method Detail

      • getId

        public StrColumn getId()
        The value of _pdbx_struct_conn_angle.id must uniquely identify a record in the PDBX_STRUCT_CONN_ANGLE list. Note that this item need not be a number; it can be any unique identifier.
        Returns:
        StrColumn
      • getPtnr1LabelAltId

        public StrColumn getPtnr1LabelAltId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1LabelAsymId

        public StrColumn getPtnr1LabelAsymId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1LabelAtomId

        public StrColumn getPtnr1LabelAtomId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1LabelCompId

        public StrColumn getPtnr1LabelCompId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1LabelSeqId

        public IntColumn getPtnr1LabelSeqId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getPtnr1AuthAsymId

        public StrColumn getPtnr1AuthAsymId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1AuthAtomId

        public StrColumn getPtnr1AuthAtomId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1AuthCompId

        public StrColumn getPtnr1AuthCompId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1AuthSeqId

        public StrColumn getPtnr1AuthSeqId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1Symmetry

        public StrColumn getPtnr1Symmetry()
        Describes the symmetry operation that should be applied to the atom specified by _pdbx_struct_conn_angle.ptnr1_label* to generate the first partner in the structure angle.
        Returns:
        StrColumn
      • getPtnr2LabelAltId

        public StrColumn getPtnr2LabelAltId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.label_alt.id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2LabelAsymId

        public StrColumn getPtnr2LabelAsymId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2LabelAtomId

        public StrColumn getPtnr2LabelAtomId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2LabelCompId

        public StrColumn getPtnr2LabelCompId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2LabelSeqId

        public IntColumn getPtnr2LabelSeqId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getPtnr2AuthAsymId

        public StrColumn getPtnr2AuthAsymId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2AuthAtomId

        public StrColumn getPtnr2AuthAtomId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2AuthCompId

        public StrColumn getPtnr2AuthCompId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2AuthSeqId

        public StrColumn getPtnr2AuthSeqId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2Symmetry

        public StrColumn getPtnr2Symmetry()
        Describes the symmetry operation that should be applied to the atom specified by _pdbx_struct_conn_angle.ptnr2_label* to generate the second partner in the structure angle.
        Returns:
        StrColumn
      • getPtnr1PDBInsCode

        public StrColumn getPtnr1PDBInsCode()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr1AuthAltId

        public StrColumn getPtnr1AuthAltId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.pdbx_auth_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2PDBInsCode

        public StrColumn getPtnr2PDBInsCode()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr2AuthAltId

        public StrColumn getPtnr2AuthAltId()
        A component of the identifier for partner 2 of the structure angle. This data item is a pointer to _atom_site.pdbx_auth_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3AuthAltId

        public StrColumn getPtnr3AuthAltId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.pdbx_auth_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3AuthAsymId

        public StrColumn getPtnr3AuthAsymId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3AuthAtomId

        public StrColumn getPtnr3AuthAtomId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3AuthCompId

        public StrColumn getPtnr3AuthCompId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3PDBInsCode

        public StrColumn getPtnr3PDBInsCode()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3AuthSeqId

        public StrColumn getPtnr3AuthSeqId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3LabelAltId

        public StrColumn getPtnr3LabelAltId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3LabelAsymId

        public StrColumn getPtnr3LabelAsymId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3LabelAtomId

        public StrColumn getPtnr3LabelAtomId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3LabelCompId

        public StrColumn getPtnr3LabelCompId()
        A component of the identifier for partner 3 of the structure angle. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPtnr3LabelSeqId

        public IntColumn getPtnr3LabelSeqId()
        A component of the identifier for partner 1 of the structure angle. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getPtnr3Symmetry

        public StrColumn getPtnr3Symmetry()
        Describes the symmetry operation that should be applied to the atom specified by _pdbx_struct_conn_angle.ptnr3_label* to generate the first partner in the structure angle.
        Returns:
        StrColumn
      • getValue

        public FloatColumn getValue()
        Angle in degrees defined by the three sites _pdbx_struct_conn_angle.ptnr1_label_atom_id, _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_atom_id
        Returns:
        FloatColumn
      • getValueEsd

        public FloatColumn getValueEsd()
        The standard uncertainty (estimated standard deviation) of _pdbx_struct_conn_angle.value
        Returns:
        FloatColumn