Package org.rcsb.cif.model.generated

Class PdbxStructChemCompDiagnostics

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxStructChemCompDiagnostics

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxStructChemCompDiagnostics
extends BaseCategory

Data items in the PDBX_STRUCT_CHEM_COMP_DIAGNOSTICS category provides structural diagnostics in chemical components instances.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxStructChemCompDiagnostics(String name)
PdbxStructChemCompDiagnostics(String name, int rowCount, Object[] encodedColumns)
PdbxStructChemCompDiagnostics(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAsymId()	Instance identifier for the polymer molecule.
StrColumn	getAuthCompId()	PDB component ID
StrColumn	getAuthSeqId()	PDB position in the sequence.
StrColumn	getDetails()	Special structural details about this chemical component.
IntColumn	getOrdinal()	An ordinal index for this category
StrColumn	getPdbInsCode()	Insertion code of the monomer or ligand .
StrColumn	getPdbStrandId()	PDB strand/chain id.
IntColumn	getSeqNum()	Position in the sequence.
StrColumn	getType()	A classification of the diagnostic for the chemical component instance

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxStructChemCompDiagnostics

public PdbxStructChemCompDiagnostics(String name,
                                     Map<String,Column> columns)

PdbxStructChemCompDiagnostics

public PdbxStructChemCompDiagnostics(String name,
                                     int rowCount,
                                     Object[] encodedColumns)

PdbxStructChemCompDiagnostics

public PdbxStructChemCompDiagnostics(String name)

Method Detail

getDetails

public StrColumn getDetails()

Special structural details about this chemical component.

Returns:

StrColumn

getType

public StrColumn getType()

A classification of the diagnostic for the chemical component instance

Returns:

StrColumn

getPdbStrandId

public StrColumn getPdbStrandId()

PDB strand/chain id.

Returns:

StrColumn

getAsymId

public StrColumn getAsymId()

Instance identifier for the polymer molecule.

Returns:

StrColumn

getAuthSeqId

public StrColumn getAuthSeqId()

PDB position in the sequence.

Returns:

StrColumn

getSeqNum

public IntColumn getSeqNum()

Position in the sequence.

Returns:

IntColumn

getAuthCompId

public StrColumn getAuthCompId()

PDB component ID

Returns:

StrColumn

getPdbInsCode

public StrColumn getPdbInsCode()

Insertion code of the monomer or ligand .

Returns:

StrColumn

getOrdinal

public IntColumn getOrdinal()

An ordinal index for this category

Returns:

IntColumn