Package org.rcsb.cif.model.generated

Class PdbxRmchOutlier

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxRmchOutlier

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxRmchOutlier
extends BaseCategory

Data items in the PDBX_RMCH_OUTLIER category list the residues with torsion angles outside the expected Ramachandran regions. This is a completely derived category. Do not edit.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxRmchOutlier(String name)
PdbxRmchOutlier(String name, int rowCount, Object[] encodedColumns)
PdbxRmchOutlier(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAuthAsymId()	Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
StrColumn	getAuthCompId()	Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
StrColumn	getAuthPDBInsertId()	Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
StrColumn	getAuthSeqId()	Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
IntColumn	getId()	The value of _pdbx_rmch_outlier.id must uniquely identify each item in the PDBX_RMCH_OUTLIER list.
StrColumn	getLabelAsymId()	Identifier of the residue.
StrColumn	getLabelCompId()	Identifier of the residue.
IntColumn	getLabelSeqId()	Identifier of the residue.
IntColumn	getModelId()	The model number for the given residue
FloatColumn	getPhi()	The phi value that for the residue that lies outside normal regions of the Rammachandran plot
FloatColumn	getPsi()	The Psi value that for the residue that lies outside of the normal region of the rammachandran plot

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxRmchOutlier

public PdbxRmchOutlier(String name,
                       Map<String,Column> columns)

PdbxRmchOutlier

public PdbxRmchOutlier(String name,
                       int rowCount,
                       Object[] encodedColumns)

PdbxRmchOutlier

public PdbxRmchOutlier(String name)

Method Detail

getId

public IntColumn getId()

The value of _pdbx_rmch_outlier.id must uniquely identify each item in the PDBX_RMCH_OUTLIER list. This is an integer serial number.

Returns:

IntColumn

getModelId

public IntColumn getModelId()

The model number for the given residue

Returns:

IntColumn

getAuthAsymId

public StrColumn getAuthAsymId()

Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthCompId

public StrColumn getAuthCompId()

Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthSeqId

public StrColumn getAuthSeqId()

Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthPDBInsertId

public StrColumn getAuthPDBInsertId()

Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

Returns:

StrColumn

getLabelAsymId

public StrColumn getLabelAsymId()

Identifier of the residue. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelCompId

public StrColumn getLabelCompId()

Identifier of the residue. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelSeqId

public IntColumn getLabelSeqId()

Identifier of the residue. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

Returns:

IntColumn

getPhi

public FloatColumn getPhi()

The phi value that for the residue that lies outside normal regions of the Rammachandran plot

Returns:

FloatColumn

getPsi

public FloatColumn getPsi()

The Psi value that for the residue that lies outside of the normal region of the rammachandran plot

Returns:

FloatColumn