Package org.rcsb.cif.model.generated

Class PdbxRefineTlsGroup

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxRefineTlsGroup

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxRefineTlsGroup
extends BaseCategory

Data items in the PDBX_REFINE_TLS_GROUP category record details about a fragment of a TLS group. Properties of the TLS group are recorded in PDBX_REFINE_TLS

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxRefineTlsGroup(String name)
PdbxRefineTlsGroup(String name, int rowCount, Object[] encodedColumns)
PdbxRefineTlsGroup(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getBegAuthAsymId()	A component of the identifier for the residue at which the TLS fragment range begins.
StrColumn	getBegAuthSeqId()	A component of the identifier for the residue at which the TLS fragment range begins.
StrColumn	getBegLabelAsymId()	A component of the identifier for the residue at which the TLS fragment range begins.
IntColumn	getBegLabelSeqId()	A component of the identifier for the residue at which the TLS fragment range begins.
StrColumn	getEndAuthAsymId()	A component of the identifier for the residue at which the TLS fragment range ends.
StrColumn	getEndAuthSeqId()	A component of the identifier for the residue at which the TLS fragment range ends.
StrColumn	getEndLabelAsymId()	A component of the identifier for the residue at which the TLS fragment range ends.
IntColumn	getEndLabelSeqId()	A component of the identifier for the residue at which the TLS fragment range ends.
StrColumn	getId()	The value of _pdbx_refine_tls_group.id must uniquely identify a record in the REFINE_TLS_GROUP list for a particular refinement.
StrColumn	getPdbxRefineId()	This data item uniquely identifies a refinement within an entry.
StrColumn	getRefineTlsId()	This data item is a pointer to _pdbx_refine_tls.id in the REFINE_TLS category.
StrColumn	getSelection()	A qualification of the subset of atoms in the specified range included in the TLS fragment.
StrColumn	getSelectionDetails()	A text description of subset of atoms included included in the TLS fragment.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxRefineTlsGroup

public PdbxRefineTlsGroup(String name,
                          Map<String,Column> columns)

PdbxRefineTlsGroup

public PdbxRefineTlsGroup(String name,
                          int rowCount,
                          Object[] encodedColumns)

PdbxRefineTlsGroup

public PdbxRefineTlsGroup(String name)

Method Detail

getId

public StrColumn getId()

The value of _pdbx_refine_tls_group.id must uniquely identify a record in the REFINE_TLS_GROUP list for a particular refinement. Note that this item need not be a number; it can be any unique identifier.

Returns:

StrColumn

getPdbxRefineId

public StrColumn getPdbxRefineId()

This data item uniquely identifies a refinement within an entry. _pdbx_refine_tls_group.pdbx_refine_id can be used to distinguish the results of joint refinements.

Returns:

StrColumn

getRefineTlsId

public StrColumn getRefineTlsId()

This data item is a pointer to _pdbx_refine_tls.id in the REFINE_TLS category.

Returns:

StrColumn

getBegLabelAsymId

public StrColumn getBegLabelAsymId()

A component of the identifier for the residue at which the TLS fragment range begins. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

Returns:

StrColumn

getBegLabelSeqId

public IntColumn getBegLabelSeqId()

A component of the identifier for the residue at which the TLS fragment range begins.

Returns:

IntColumn

getBegAuthAsymId

public StrColumn getBegAuthAsymId()

A component of the identifier for the residue at which the TLS fragment range begins.

Returns:

StrColumn

getBegAuthSeqId

public StrColumn getBegAuthSeqId()

A component of the identifier for the residue at which the TLS fragment range begins.

Returns:

StrColumn

getEndLabelAsymId

public StrColumn getEndLabelAsymId()

A component of the identifier for the residue at which the TLS fragment range ends. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

Returns:

StrColumn

getEndLabelSeqId

public IntColumn getEndLabelSeqId()

A component of the identifier for the residue at which the TLS fragment range ends.

Returns:

IntColumn

getEndAuthAsymId

public StrColumn getEndAuthAsymId()

A component of the identifier for the residue at which the TLS fragment range ends.

Returns:

StrColumn

getEndAuthSeqId

public StrColumn getEndAuthSeqId()

A component of the identifier for the residue at which the TLS fragment range ends.

Returns:

StrColumn

getSelection

public StrColumn getSelection()

A qualification of the subset of atoms in the specified range included in the TLS fragment.

Returns:

StrColumn

getSelectionDetails

public StrColumn getSelectionDetails()

A text description of subset of atoms included included in the TLS fragment.

Returns:

StrColumn