java.lang.Object
- org.rcsb.cif.model.BaseCategory
- - org.rcsb.cif.model.generated.PdbxRefine

All Implemented Interfaces:

Category
```
@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxRefine
extends BaseCategory
```
Data items in the PDBX_REFINE category record details about additional structure refinement parameters which are needed to complete legacy REMARK 3 refinement templates in PDB format files.

Field Summary
- Fields inherited from class org.rcsb.cif.model.BaseCategory
  isText, textFields

Constructor Summary

Constructors
Constructor	Description
`PdbxRefine(String name)`
`PdbxRefine(String name, int rowCount, Object[] encodedColumns)`
`PdbxRefine(String name, Map<String,Column> columns)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`StrColumn`	`getEntryId()`	This data item is a pointer to _entry.id in the ENTRY category.
`FloatColumn`	`getFreeRErrorNoCutoff()`	Free R-value error(no cutoff)
`FloatColumn`	`getFreeRFactor4sigCutoff()`	R free value (4 sigma cutoff).
`FloatColumn`	`getFreeRFactorNoCutoff()`	Free R-value (no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getFreeRVal4sigCutoff()`	Free R-value (4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getFreeRValNoCutoff()`	Free R-value (no cutoff)
`FloatColumn`	`getFreeRValTestSetCt4sigCutoff()`	Free R-value test set count (4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getFreeRValTestSetCtNoCutoff()`	Free R-value test set count (no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getFreeRValTestSetSizePerc4sigCutoff()`	Free R-value test set size (in percent, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getFreeRValTestSetSizePercNoCutoff()`	Free R-value test set size (in percent, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getNumberReflnsObs4sigCutoff()`	Total number of reflections (4 sigma cutoff).
`FloatColumn`	`getNumberReflnsObsNoCutoff()`	Total number of reflections (no cutoff).
`StrColumn`	`getPdbxRefineId()`	This data item uniquely identifies a refinement within an entry.
`FloatColumn`	`getRFactorAll4sigCutoff()`	R-value (all reflections, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getRFactorAllNoCutoff()`	R-value (all reflections, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getRFactorObs4sigCutoff()`	R-value (working set, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
`FloatColumn`	`getRFactorObsNoCutoff()`	R-value (working set reflections, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.

Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get

- Constructor Detail
  - PdbxRefine
```
public PdbxRefine(String name,
                  Map<String,Column> columns)
```
  - PdbxRefine
```
public PdbxRefine(String name,
                  int rowCount,
                  Object[] encodedColumns)
```
  - PdbxRefine
```
public PdbxRefine(String name)
```
- Method Detail
  - getEntryId
```
public StrColumn getEntryId()
```
    This data item is a pointer to _entry.id in the ENTRY category.
    
    Returns:
    
    StrColumn
  - getPdbxRefineId
```
public StrColumn getPdbxRefineId()
```
    This data item uniquely identifies a refinement within an entry. _pdbx_refine.pdbx_refine_id can be used to distinguish the results of joint refinements.
    
    Returns:
    
    StrColumn
  - getRFactorAllNoCutoff
```
public FloatColumn getRFactorAllNoCutoff()
```
    R-value (all reflections, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getRFactorObsNoCutoff
```
public FloatColumn getRFactorObsNoCutoff()
```
    R-value (working set reflections, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRFactor4sigCutoff
```
public FloatColumn getFreeRFactor4sigCutoff()
```
    R free value (4 sigma cutoff). Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRFactorNoCutoff
```
public FloatColumn getFreeRFactorNoCutoff()
```
    Free R-value (no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRErrorNoCutoff
```
public FloatColumn getFreeRErrorNoCutoff()
```
    Free R-value error(no cutoff)
    
    Returns:
    
    FloatColumn
  - getFreeRValTestSetSizePercNoCutoff
```
public FloatColumn getFreeRValTestSetSizePercNoCutoff()
```
    Free R-value test set size (in percent, no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRValTestSetCtNoCutoff
```
public FloatColumn getFreeRValTestSetCtNoCutoff()
```
    Free R-value test set count (no cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getNumberReflnsObsNoCutoff
```
public FloatColumn getNumberReflnsObsNoCutoff()
```
    Total number of reflections (no cutoff). Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getRFactorAll4sigCutoff
```
public FloatColumn getRFactorAll4sigCutoff()
```
    R-value (all reflections, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getRFactorObs4sigCutoff
```
public FloatColumn getRFactorObs4sigCutoff()
```
    R-value (working set, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRVal4sigCutoff
```
public FloatColumn getFreeRVal4sigCutoff()
```
    Free R-value (4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRValTestSetSizePerc4sigCutoff
```
public FloatColumn getFreeRValTestSetSizePerc4sigCutoff()
```
    Free R-value test set size (in percent, 4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRValTestSetCt4sigCutoff
```
public FloatColumn getFreeRValTestSetCt4sigCutoff()
```
    Free R-value test set count (4 sigma cutoff) Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getNumberReflnsObs4sigCutoff
```
public FloatColumn getNumberReflnsObs4sigCutoff()
```
    Total number of reflections (4 sigma cutoff). Placeholder for PDB mapping of SHELXL refinement data.
    
    Returns:
    
    FloatColumn
  - getFreeRValNoCutoff
```
public FloatColumn getFreeRValNoCutoff()
```
    Free R-value (no cutoff)
    
    Returns:
    
    FloatColumn

Class PdbxRefine

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

Constructor Summary

Method Summary

Methods inherited from class org.rcsb.cif.model.BaseCategory

Methods inherited from class java.lang.Object

Methods inherited from interface org.rcsb.cif.model.Category

Constructor Detail

PdbxRefine

PdbxRefine

PdbxRefine

Method Detail

getEntryId

getPdbxRefineId

getRFactorAllNoCutoff

getRFactorObsNoCutoff

getFreeRFactor4sigCutoff

getFreeRFactorNoCutoff

getFreeRErrorNoCutoff

getFreeRValTestSetSizePercNoCutoff

getFreeRValTestSetCtNoCutoff

getNumberReflnsObsNoCutoff

getRFactorAll4sigCutoff

getRFactorObs4sigCutoff

getFreeRVal4sigCutoff

getFreeRValTestSetSizePerc4sigCutoff

getFreeRValTestSetCt4sigCutoff

getNumberReflnsObs4sigCutoff

getFreeRValNoCutoff