Package org.rcsb.cif.model.generated

Class PdbxReferenceLinkedEntity

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxReferenceLinkedEntity

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxReferenceLinkedEntity
extends BaseCategory

Data items in the pdbx_reference_linked_entity category describe common observed interaction patterns within linked entities.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxReferenceLinkedEntity(String name)
PdbxReferenceLinkedEntity(String name, int rowCount, Object[] encodedColumns)
PdbxReferenceLinkedEntity(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getClazz()	Broadly classifies of this linked entity example.
IntColumn	getId()	The value of _pdbx_reference_linked_entity.id uniquely identifies examples in the list of observed linking patterns.
StrColumn	getLinkFromEntityType()	The polymer linking type of the second partner entity in example linkage.
StrColumn	getLinkToCompId()	The component identifer for the component in the first partner of the example linkage.
StrColumn	getLinkToEntityType()	The polymer linking type of the first partner entity in example linkage.
StrColumn	getName()	The name of the linked entity example.
StrColumn	getTaxonomyClass()	The NCBI taxonomy classification of the organism for this linked entity example.
StrColumn	getTaxonomyId()	The NCBI taxonomy identifier of the organism for the linked entity example.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxReferenceLinkedEntity

public PdbxReferenceLinkedEntity(String name,
                                 Map<String,Column> columns)

PdbxReferenceLinkedEntity

public PdbxReferenceLinkedEntity(String name,
                                 int rowCount,
                                 Object[] encodedColumns)

PdbxReferenceLinkedEntity

public PdbxReferenceLinkedEntity(String name)

Method Detail

getId

public IntColumn getId()

The value of _pdbx_reference_linked_entity.id uniquely identifies examples in the list of observed linking patterns.

Returns:

IntColumn

getClazz

public StrColumn getClazz()

Broadly classifies of this linked entity example.

Returns:

StrColumn

getName

public StrColumn getName()

The name of the linked entity example.

Returns:

StrColumn

getTaxonomyId

public StrColumn getTaxonomyId()

The NCBI taxonomy identifier of the organism for the linked entity example.

Returns:

StrColumn

getTaxonomyClass

public StrColumn getTaxonomyClass()

The NCBI taxonomy classification of the organism for this linked entity example.

Returns:

StrColumn

getLinkToEntityType

public StrColumn getLinkToEntityType()

The polymer linking type of the first partner entity in example linkage.

Returns:

StrColumn

getLinkToCompId

public StrColumn getLinkToCompId()

The component identifer for the component in the first partner of the example linkage.

Returns:

StrColumn

getLinkFromEntityType

public StrColumn getLinkFromEntityType()

The polymer linking type of the second partner entity in example linkage.

Returns:

StrColumn