Package org.rcsb.cif.model.generated

Class PdbxPrereleaseSeq

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxPrereleaseSeq

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxPrereleaseSeq
extends BaseCategory

This category provides a placeholder for pre-release sequence information. After release this category should be discarded.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxPrereleaseSeq(String name)
PdbxPrereleaseSeq(String name, int rowCount, Object[] encodedColumns)
PdbxPrereleaseSeq(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getEntityId()	This data item is a pointer to _entity.id in the ENTITY category.
StrColumn	getSeqOneLetterCode()	Chemical sequence expressed as string of one-letter amino acid codes.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxPrereleaseSeq

public PdbxPrereleaseSeq(String name,
                         Map<String,Column> columns)

PdbxPrereleaseSeq

public PdbxPrereleaseSeq(String name,
                         int rowCount,
                         Object[] encodedColumns)

PdbxPrereleaseSeq

public PdbxPrereleaseSeq(String name)

Method Detail

getEntityId

public StrColumn getEntityId()

This data item is a pointer to _entity.id in the ENTITY category.

Returns:

StrColumn

getSeqOneLetterCode

public StrColumn getSeqOneLetterCode()

Chemical sequence expressed as string of one-letter amino acid codes. A for alanine or adenine B for ambiguous asparagine/aspartic-acid R for arginine N for asparagine D for aspartic-acid C for cysteine or cystine or cytosine Q for glutamine E for glutamic-acid Z for ambiguous glutamine/glutamic acid G for glycine or guanine H for histidine I for isoleucine L for leucine K for lysine M for methionine F for phenylalanine P for proline S for serine T for threonine or thymine W for tryptophan Y for tyrosine V for valine U for uracil

Returns:

StrColumn