Package org.rcsb.cif.model.generated

Class PdbxMissingAtomNonpoly

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxMissingAtomNonpoly

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxMissingAtomNonpoly
extends BaseCategory

Data items in the PDBX_MISSING_ATOM_NONPOLY category list the atoms missing in nonpolymer residues. This is a completely derived category. Do not edit.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxMissingAtomNonpoly(String name)
PdbxMissingAtomNonpoly(String name, int rowCount, Object[] encodedColumns)
PdbxMissingAtomNonpoly(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAtomName()	Identifier of missing atom.
StrColumn	getAuthAsymId()	Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
StrColumn	getAuthCompId()	Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
StrColumn	getAuthPDBInsertId()	Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.
StrColumn	getAuthSeqId()	Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
IntColumn	getId()	The value of _pdbx_missing_atom_nonpoly.id must uniquely identify each item in the PDBX_MISSING_ATOM_NONPOLY list.
StrColumn	getLabelAsymId()	Identifier of the residue.
StrColumn	getLabelCompId()	Identifier of the residue.
IntColumn	getModelId()	The model number for the given residue

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxMissingAtomNonpoly

public PdbxMissingAtomNonpoly(String name,
                              Map<String,Column> columns)

PdbxMissingAtomNonpoly

public PdbxMissingAtomNonpoly(String name,
                              int rowCount,
                              Object[] encodedColumns)

PdbxMissingAtomNonpoly

public PdbxMissingAtomNonpoly(String name)

Method Detail

getId

public IntColumn getId()

The value of _pdbx_missing_atom_nonpoly.id must uniquely identify each item in the PDBX_MISSING_ATOM_NONPOLY list. This is an integer serial number.

Returns:

IntColumn

getModelId

public IntColumn getModelId()

The model number for the given residue

Returns:

IntColumn

getAuthAsymId

public StrColumn getAuthAsymId()

Identifier of the residue This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthCompId

public StrColumn getAuthCompId()

Identifier of the residue This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthSeqId

public StrColumn getAuthSeqId()

Identifier of the residue This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthPDBInsertId

public StrColumn getAuthPDBInsertId()

Identifier of the residue This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the ATOM_SITE category.

Returns:

StrColumn

getLabelAsymId

public StrColumn getLabelAsymId()

Identifier of the residue. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelCompId

public StrColumn getLabelCompId()

Identifier of the residue. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getAtomName

public StrColumn getAtomName()

Identifier of missing atom.

Returns:

StrColumn