Package org.rcsb.cif.model.generated

Class PdbxFeatureMonomer

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxFeatureMonomer

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxFeatureMonomer
extends BaseCategory

Data items in the PDBX_FEATURE_MONOMER category records information about properties pertaining to particular monomers in this structure.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxFeatureMonomer(String name)
PdbxFeatureMonomer(String name, int rowCount, Object[] encodedColumns)
PdbxFeatureMonomer(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAuthAsymId()	A component of the identifier for the monomer.
StrColumn	getAuthCompId()	A component of the identifier for the monomer.
StrColumn	getAuthSeqId()	A component of the identifier for the monomer.
StrColumn	getFeature()	The value of _pdbx_feature_monomer.feature_name.
StrColumn	getFeatureAssignedBy()	_pdbx_feature_monomer.feature_assigned_by identifies the individual, organization or program that assigned the feature.
StrColumn	getFeatureCitationId()	_pdbx_feature_monomer.feature_citation_id is a reference to a citation in the CITATION category.
StrColumn	getFeatureIdentifier()	_pdbx_feature_monomer.feature_identifier is an additional identifier used to identify or accession this feature.
StrColumn	getFeatureName()	_pdbx_feature_monomer.feature_name identifies a feature by name.
StrColumn	getFeatureSoftwareId()	_pdbx_feature_monomer.feature_software_id is a reference to an application described in the SOFTWARE category.
StrColumn	getFeatureType()	_pdbx_feature_monomer.feature_type identifies the type of feature.
StrColumn	getId()	The value of _pdbx_feature_monomer.id uniquely identifies a feature in the PDBX_FEATURE_MONOMER category.
StrColumn	getLabelAltId()	A component of the identifier for the monomer.
StrColumn	getLabelAsymId()	A component of the identifier for the monomer.
StrColumn	getLabelCompId()	A component of the identifier for the monomer.
IntColumn	getLabelSeqId()	A component of the identifier for the monomer.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxFeatureMonomer

public PdbxFeatureMonomer(String name,
                          Map<String,Column> columns)

PdbxFeatureMonomer

public PdbxFeatureMonomer(String name,
                          int rowCount,
                          Object[] encodedColumns)

PdbxFeatureMonomer

public PdbxFeatureMonomer(String name)

Method Detail

getId

public StrColumn getId()

The value of _pdbx_feature_monomer.id uniquely identifies a feature in the PDBX_FEATURE_MONOMER category.

Returns:

StrColumn

getFeatureName

public StrColumn getFeatureName()

_pdbx_feature_monomer.feature_name identifies a feature by name.

Returns:

StrColumn

getFeatureType

public StrColumn getFeatureType()

_pdbx_feature_monomer.feature_type identifies the type of feature.

Returns:

StrColumn

getFeature

public StrColumn getFeature()

The value of _pdbx_feature_monomer.feature_name.

Returns:

StrColumn

getFeatureIdentifier

public StrColumn getFeatureIdentifier()

_pdbx_feature_monomer.feature_identifier is an additional identifier used to identify or accession this feature.

Returns:

StrColumn

getFeatureAssignedBy

public StrColumn getFeatureAssignedBy()

_pdbx_feature_monomer.feature_assigned_by identifies the individual, organization or program that assigned the feature.

Returns:

StrColumn

getFeatureCitationId

public StrColumn getFeatureCitationId()

_pdbx_feature_monomer.feature_citation_id is a reference to a citation in the CITATION category.

Returns:

StrColumn

getFeatureSoftwareId

public StrColumn getFeatureSoftwareId()

_pdbx_feature_monomer.feature_software_id is a reference to an application described in the SOFTWARE category.

Returns:

StrColumn

getLabelAltId

public StrColumn getLabelAltId()

A component of the identifier for the monomer. This data item is a pointer to _atom_sites_alt.id in the ATOM_SITES_ALT category.

Returns:

StrColumn

getLabelAsymId

public StrColumn getLabelAsymId()

A component of the identifier for the monomer. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelCompId

public StrColumn getLabelCompId()

A component of the identifier for the monomer. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getLabelSeqId

public IntColumn getLabelSeqId()

A component of the identifier for the monomer. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.

Returns:

IntColumn

getAuthAsymId

public StrColumn getAuthAsymId()

A component of the identifier for the monomer. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthCompId

public StrColumn getAuthCompId()

A component of the identifier for the monomer. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.

Returns:

StrColumn

getAuthSeqId

public StrColumn getAuthSeqId()

A component of the identifier for the monomer. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.

Returns:

StrColumn