Package org.rcsb.cif.model.generated

Class PdbxEntitySrcGenProdOther

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxEntitySrcGenProdOther

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxEntitySrcGenProdOther
extends BaseCategory

This category contains details for process steps that are not explicitly catered for elsewhere. It provides some basic details as well as placeholders for a list of parameters and values (the category PDBX_ENTITY_SRC_GEN_PROD_OTHER_PARAMETER). Note that processes that have been modelled explicitly should not be represented using this category.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxEntitySrcGenProdOther(String name)
PdbxEntitySrcGenProdOther(String name, int rowCount, Object[] encodedColumns)
PdbxEntitySrcGenProdOther(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getDate()	The date of this process step.
StrColumn	getDetails()	Additional details of this process step.
StrColumn	getEndConstructId()	This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category.
StrColumn	getEntityId()	The value of _pdbx_entity_src_gen_prod_other.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined.
StrColumn	getEntryId()	The value of _pdbx_entity_src_gen_prod_other.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.
IntColumn	getNextStepId()	This item unique identifier for the next production step.
StrColumn	getProcessName()	Name of this process step.
StrColumn	getRobotId()	This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category.
IntColumn	getStepId()	This item is the unique identifier for this process step.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxEntitySrcGenProdOther

public PdbxEntitySrcGenProdOther(String name,
                                 Map<String,Column> columns)

PdbxEntitySrcGenProdOther

public PdbxEntitySrcGenProdOther(String name,
                                 int rowCount,
                                 Object[] encodedColumns)

PdbxEntitySrcGenProdOther

public PdbxEntitySrcGenProdOther(String name)

Method Detail

getEntryId

public StrColumn getEntryId()

The value of _pdbx_entity_src_gen_prod_other.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined. This is a pointer to _entry.id. This item may be a site dependent bar code.

Returns:

StrColumn

getEntityId

public StrColumn getEntityId()

The value of _pdbx_entity_src_gen_prod_other.entity_id uniquely identifies each protein contained in the project target protein complex whose structure is to be determined. This data item is a pointer to _entity.id in the ENTITY category. This item may be a site dependent bar code.

Returns:

StrColumn

getStepId

public IntColumn getStepId()

This item is the unique identifier for this process step.

Returns:

IntColumn

getNextStepId

public IntColumn getNextStepId()

This item unique identifier for the next production step. This allows a workflow to have multiple entry points leading to a single product.

Returns:

IntColumn

getEndConstructId

public StrColumn getEndConstructId()

This item is a pointer to pdbx_construct.id in the PDBX_CONSTRUCT category. The referenced nucleic acid sequence is that of the product of the process step.

Returns:

StrColumn

getRobotId

public StrColumn getRobotId()

This data item is a pointer to pdbx_robot_system.id in the PDBX_ROBOT_SYSTEM category. The referenced robot is the robot responsible for the process step

Returns:

StrColumn

getDate

public StrColumn getDate()

The date of this process step.

Returns:

StrColumn

getProcessName

public StrColumn getProcessName()

Name of this process step.

Returns:

StrColumn

getDetails

public StrColumn getDetails()

Additional details of this process step.

Returns:

StrColumn