Package org.rcsb.cif.model.generated

Class PdbxEntityBranchList

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxEntityBranchList

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxEntityBranchList
extends BaseCategory

Data items in the PDBX_ENTITY_BRANCH_LIST category specify the list of monomers in a branched entity. Allowance is made for the possibility of microheterogeneity in a sample by allowing a given sequence number to be correlated with more than one monomer ID. The corresponding ATOM_SITE entries should reflect this heterogeneity.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxEntityBranchList(String name)
PdbxEntityBranchList(String name, int rowCount, Object[] encodedColumns)
PdbxEntityBranchList(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getCompId()	This data item is a pointer to _chem_comp.id in the CHEM_COMP category.
StrColumn	getEntityId()	This data item is a pointer to _entity.id in the ENTITY category.
StrColumn	getHetero()	A flag to indicate whether this monomer in the entity is heterogeneous in sequence.
IntColumn	getNum()	The value pair _pdbx_entity_branch_list.num and _pdbx_entity_branch_list.comp_id must uniquely identify a record in the PDBX_ENTITY_BRANCH_LIST list.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxEntityBranchList

public PdbxEntityBranchList(String name,
                            Map<String,Column> columns)

PdbxEntityBranchList

public PdbxEntityBranchList(String name,
                            int rowCount,
                            Object[] encodedColumns)

PdbxEntityBranchList

public PdbxEntityBranchList(String name)

Method Detail

getEntityId

public StrColumn getEntityId()

This data item is a pointer to _entity.id in the ENTITY category.

Returns:

StrColumn

getHetero

public StrColumn getHetero()

A flag to indicate whether this monomer in the entity is heterogeneous in sequence.

Returns:

StrColumn

getCompId

public StrColumn getCompId()

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

Returns:

StrColumn

getNum

public IntColumn getNum()

The value pair _pdbx_entity_branch_list.num and _pdbx_entity_branch_list.comp_id must uniquely identify a record in the PDBX_ENTITY_BRANCH_LIST list.

Returns:

IntColumn