Package org.rcsb.cif.model.generated

Class PdbxDccDensityCorr

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxDccDensityCorr

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxDccDensityCorr
extends BaseCategory

Data items in the category record calculated metrics from various programs (such as phenix, refmac, cns, sfcheck).

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxDccDensityCorr(String name)
PdbxDccDensityCorr(String name, int rowCount, Object[] encodedColumns)
PdbxDccDensityCorr(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
FloatColumn	getCorrelation()	The overall real space density correlation coefficient.
FloatColumn	getCorrelationCoeffFoToFc()	The correlations between the observed and calculated structure factors.
StrColumn	getDetails()	Any additional details of the calculations.
FloatColumn	getLsDResHigh()	The highest resolution limit in calculating the metrics in this category.
FloatColumn	getLsDResLow()	The lowest resolution limit in calculating the metrics in this category.
IntColumn	getLsNumberReflnsObs()	The number of unique reflections (work+test sets).
IntColumn	getLsNumberReflnsRFree()	The number of reflections for the test set only.
FloatColumn	getLsPercentReflnsObs()	The percentage of unique reflections (work+test sets).
FloatColumn	getLsRFactorRAll()	The calculated Rfactor using all the data.
FloatColumn	getLsRFactorRFree()	The calculated Rfree using the test set data.
FloatColumn	getLsRFactorRWork()	The calculated Rfactor using the working set data.
IntColumn	getOrdinal()	The ordered number in the output list.
StrColumn	getProgram()	The program used to calculate the metrics in this category.
FloatColumn	getRealSpaceR()	The overall real space R factor.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxDccDensityCorr

public PdbxDccDensityCorr(String name,
                          Map<String,Column> columns)

PdbxDccDensityCorr

public PdbxDccDensityCorr(String name,
                          int rowCount,
                          Object[] encodedColumns)

PdbxDccDensityCorr

public PdbxDccDensityCorr(String name)

Method Detail

getOrdinal

public IntColumn getOrdinal()

The ordered number in the output list.

Returns:

IntColumn

getProgram

public StrColumn getProgram()

The program used to calculate the metrics in this category.

Returns:

StrColumn

getLsDResHigh

public FloatColumn getLsDResHigh()

The highest resolution limit in calculating the metrics in this category.

Returns:

FloatColumn

getLsDResLow

public FloatColumn getLsDResLow()

The lowest resolution limit in calculating the metrics in this category.

Returns:

FloatColumn

getLsRFactorRAll

public FloatColumn getLsRFactorRAll()

The calculated Rfactor using all the data.

Returns:

FloatColumn

getLsRFactorRWork

public FloatColumn getLsRFactorRWork()

The calculated Rfactor using the working set data.

Returns:

FloatColumn

getLsRFactorRFree

public FloatColumn getLsRFactorRFree()

The calculated Rfree using the test set data.

Returns:

FloatColumn

getLsNumberReflnsObs

public IntColumn getLsNumberReflnsObs()

The number of unique reflections (work+test sets).

Returns:

IntColumn

getLsPercentReflnsObs

public FloatColumn getLsPercentReflnsObs()

The percentage of unique reflections (work+test sets).

Returns:

FloatColumn

getLsNumberReflnsRFree

public IntColumn getLsNumberReflnsRFree()

The number of reflections for the test set only.

Returns:

IntColumn

getCorrelationCoeffFoToFc

public FloatColumn getCorrelationCoeffFoToFc()

The correlations between the observed and calculated structure factors.

Returns:

FloatColumn

getRealSpaceR

public FloatColumn getRealSpaceR()

The overall real space R factor.

Returns:

FloatColumn

getCorrelation

public FloatColumn getCorrelation()

The overall real space density correlation coefficient.

Returns:

FloatColumn

getDetails

public StrColumn getDetails()

Any additional details of the calculations.

Returns:

StrColumn