Package org.rcsb.cif.model.generated

Class PdbxConstructFeature

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxConstructFeature

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxConstructFeature
extends BaseCategory

Data items in the PDBX_CONSTRUCT_FEATURE category may be used to specify various properties of a nucleic acid sequence used during protein production.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxConstructFeature(String name)
PdbxConstructFeature(String name, int rowCount, Object[] encodedColumns)
PdbxConstructFeature(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getConstructId()	The value of _pdbx_construct_feature.construct_id uniquely identifies the construct with which the feature is associated.
StrColumn	getDetails()	Details that describe the feature
IntColumn	getEndSeq()	The sequence position at which the feature ends
StrColumn	getEntryId()	The value of _pdbx_construct_feature.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined.
StrColumn	getId()	The value of _pdbx_construct_feature.id must uniquely identify a record in the PDBX_CONSTRUCT_FEATURE list.
IntColumn	getStartSeq()	The sequence position at which the feature begins
StrColumn	getType()	The type of the feature

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxConstructFeature

public PdbxConstructFeature(String name,
                            Map<String,Column> columns)

PdbxConstructFeature

public PdbxConstructFeature(String name,
                            int rowCount,
                            Object[] encodedColumns)

PdbxConstructFeature

public PdbxConstructFeature(String name)

Method Detail

getId

public StrColumn getId()

The value of _pdbx_construct_feature.id must uniquely identify a record in the PDBX_CONSTRUCT_FEATURE list. Note that this item need not be a number; it can be any unique identifier.

Returns:

StrColumn

getConstructId

public StrColumn getConstructId()

The value of _pdbx_construct_feature.construct_id uniquely identifies the construct with which the feature is associated. This is a pointer to _pdbx_construct.id This item may be a site dependent bar code.

Returns:

StrColumn

getEntryId

public StrColumn getEntryId()

The value of _pdbx_construct_feature.entry_id uniquely identifies a sample consisting of one or more proteins whose structure is to be determined. This is a pointer to _entry.id. This item may be a site dependent bar code.

Returns:

StrColumn

getStartSeq

public IntColumn getStartSeq()

The sequence position at which the feature begins

Returns:

IntColumn

getEndSeq

public IntColumn getEndSeq()

The sequence position at which the feature ends

Returns:

IntColumn

getType

public StrColumn getType()

The type of the feature

Returns:

StrColumn

getDetails

public StrColumn getDetails()

Details that describe the feature

Returns:

StrColumn