Package org.rcsb.cif.model.generated

Class PdbxChemCompAtomRelated

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.PdbxChemCompAtomRelated

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class PdbxChemCompAtomRelated
extends BaseCategory

PDBX_CHEM_COMP_ATOM_RELATED provides atom level nomenclature mapping between two related chemical components.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
PdbxChemCompAtomRelated(String name)
PdbxChemCompAtomRelated(String name, int rowCount, Object[] encodedColumns)
PdbxChemCompAtomRelated(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAtomId()	The atom identifier/name for the atom mapping
StrColumn	getCompId()	The chemical component for which this relationship applies.
IntColumn	getOrdinal()	An ordinal index for this category
StrColumn	getRelatedAtomId()	The atom identifier/name for the atom mapping in the related chemical component
StrColumn	getRelatedCompId()	The related chemical component for which this chemical component is based.
StrColumn	getRelatedType()	Describes the type of relationship

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

PdbxChemCompAtomRelated

public PdbxChemCompAtomRelated(String name,
                               Map<String,Column> columns)

PdbxChemCompAtomRelated

public PdbxChemCompAtomRelated(String name,
                               int rowCount,
                               Object[] encodedColumns)

PdbxChemCompAtomRelated

public PdbxChemCompAtomRelated(String name)

Method Detail

getCompId

public StrColumn getCompId()

The chemical component for which this relationship applies.

Returns:

StrColumn

getRelatedCompId

public StrColumn getRelatedCompId()

The related chemical component for which this chemical component is based.

Returns:

StrColumn

getOrdinal

public IntColumn getOrdinal()

An ordinal index for this category

Returns:

IntColumn

getAtomId

public StrColumn getAtomId()

The atom identifier/name for the atom mapping

Returns:

StrColumn

getRelatedAtomId

public StrColumn getRelatedAtomId()

The atom identifier/name for the atom mapping in the related chemical component

Returns:

StrColumn

getRelatedType

public StrColumn getRelatedType()

Describes the type of relationship

Returns:

StrColumn