Package org.rcsb.cif.model.generated

Class IhmPolyAtomFeature

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.IhmPolyAtomFeature

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class IhmPolyAtomFeature
extends BaseCategory

Data items in the IHM_POLY_ATOM_FEATURE category provides the defintions required to select specific atoms.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
IhmPolyAtomFeature(String name)
IhmPolyAtomFeature(String name, int rowCount, Object[] encodedColumns)
IhmPolyAtomFeature(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAsymId()	An asym/strand identifier of the atom, if applicable.
StrColumn	getAtomId()	The identifier of the atom.
StrColumn	getCompId()	The component identifier of the atom.
StrColumn	getEntityId()	The entity identifier of the atom.
IntColumn	getFeatureId()	An identifier for the selected atom feature.
IntColumn	getOrdinalId()	A unique identifier for the category.
IntColumn	getSeqId()	The sequence index of the residue to which the atom belongs.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

IhmPolyAtomFeature

public IhmPolyAtomFeature(String name,
                          Map<String,Column> columns)

IhmPolyAtomFeature

public IhmPolyAtomFeature(String name,
                          int rowCount,
                          Object[] encodedColumns)

IhmPolyAtomFeature

public IhmPolyAtomFeature(String name)

Method Detail

getOrdinalId

public IntColumn getOrdinalId()

A unique identifier for the category.

Returns:

IntColumn

getFeatureId

public IntColumn getFeatureId()

An identifier for the selected atom feature. This data item is a pointer to _ihm_feature_list.feature_id in the IHM_FEATURE_LIST category.

Returns:

IntColumn

getEntityId

public StrColumn getEntityId()

The entity identifier of the atom. This data item is a pointer to _entity_poly_seq.entity_id in the ENTITY_POLY_SEQ category.

Returns:

StrColumn

getAsymId

public StrColumn getAsymId()

An asym/strand identifier of the atom, if applicable. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

Returns:

StrColumn

getCompId

public StrColumn getCompId()

The component identifier of the atom. This data item is a pointer to _entity_poly_seq.mon_id in the ENTITY_POLY_SEQ category.

Returns:

StrColumn

getSeqId

public IntColumn getSeqId()

The sequence index of the residue to which the atom belongs. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.

Returns:

IntColumn

getAtomId

public StrColumn getAtomId()

The identifier of the atom. This data item is a pointer to _chem_comp_atom.atom_id in the CHEM_COMP_ATOM category.

Returns:

StrColumn