Package org.rcsb.cif.model.generated

Class IhmLocalizationDensityFiles

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.IhmLocalizationDensityFiles

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class IhmLocalizationDensityFiles
extends BaseCategory

Data items in the IHM_LOCALIZATION_DENSITY_FILES category records the details of files that provide information regarding localization densities of ensembles. These may be stored externally as local files or linked via DOI and can be in any accepted format that provides volume information (CCP4, MRC, etc.).

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
IhmLocalizationDensityFiles(String name)
IhmLocalizationDensityFiles(String name, int rowCount, Object[] encodedColumns)
IhmLocalizationDensityFiles(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAsymId()	An asym/strand identifier corresponding to this localization density.
IntColumn	getEnsembleId()	The ensemble identifier for the ensemble, for which the localization density is provided.
StrColumn	getEntityId()	The entity identifier corresponding to this localization density.
IntColumn	getFileId()	The file id for the externally stored localization density file.
IntColumn	getId()	A unique identifier.
IntColumn	getSeqIdBegin()	The leading sequence index corresponding to this localization density.
IntColumn	getSeqIdEnd()	The trailing sequence index corresponding to this localization density.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

IhmLocalizationDensityFiles

public IhmLocalizationDensityFiles(String name,
                                   Map<String,Column> columns)

IhmLocalizationDensityFiles

public IhmLocalizationDensityFiles(String name,
                                   int rowCount,
                                   Object[] encodedColumns)

IhmLocalizationDensityFiles

public IhmLocalizationDensityFiles(String name)

Method Detail

getId

public IntColumn getId()

A unique identifier.

Returns:

IntColumn

getFileId

public IntColumn getFileId()

The file id for the externally stored localization density file. This data item is a pointer to _ihm_external_files.id in the IHM_EXTERNAL_FILES category.

Returns:

IntColumn

getEnsembleId

public IntColumn getEnsembleId()

The ensemble identifier for the ensemble, for which the localization density is provided. This data item is a pointer to _ihm_ensemble_info.ensemble_id in the IHM_ENSEMBLE_INFO category.

Returns:

IntColumn

getEntityId

public StrColumn getEntityId()

The entity identifier corresponding to this localization density. This data item is a pointer to _entity.id in the ENTITY category.

Returns:

StrColumn

getSeqIdBegin

public IntColumn getSeqIdBegin()

The leading sequence index corresponding to this localization density. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY category.

Returns:

IntColumn

getSeqIdEnd

public IntColumn getSeqIdEnd()

The trailing sequence index corresponding to this localization density. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY category.

Returns:

IntColumn

getAsymId

public StrColumn getAsymId()

An asym/strand identifier corresponding to this localization density. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.

Returns:

StrColumn