Package org.rcsb.cif.model.generated
Class IhmHydroxylRadicalFpRestraint
- java.lang.Object
-
- org.rcsb.cif.model.BaseCategory
-
- org.rcsb.cif.model.generated.IhmHydroxylRadicalFpRestraint
-
- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.generator.SchemaGenerator") public class IhmHydroxylRadicalFpRestraint extends BaseCategory
Data items in the IHM_HYDROXYL_RADICAL_FP_RESTRAINT category records the restraints derived from hydroxyl radical footprinting experiment. These restraints provide information regarding solvent accessible surface area of residues.
-
-
Field Summary
-
Fields inherited from class org.rcsb.cif.model.BaseCategory
isText, textFields
-
-
Constructor Summary
Constructors Constructor Description IhmHydroxylRadicalFpRestraint(String name)IhmHydroxylRadicalFpRestraint(String name, int rowCount, Object[] encodedColumns)IhmHydroxylRadicalFpRestraint(String name, Map<String,Column> columns)
-
Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description StrColumngetAsymId()An asym/strand identifier.StrColumngetCompId()The component identifier for the residue.IntColumngetDatasetListId()Identifier to the hydroxyl radical footprinting dataset.StrColumngetEntityDescription()A text description of the molecular entity.StrColumngetEntityId()The entity identifier.FloatColumngetFpRate()The footprinting rate.FloatColumngetFpRateError()The footprinting rate error.IntColumngetGroupId()An identifier to group the hydroxyl radical footprinting restraints.IntColumngetId()A unique identifier for the hydroxyl radical footprinting restraint.FloatColumngetLogPf()Log (base 10) protection factor.FloatColumngetLogPfError()Error of Log (base 10) protection factor.FloatColumngetPredictedSasa()The predicted solvent accessible surface area.IntColumngetSeqId()The sequence index for the residue.IntColumngetSoftwareId()Identifier to the software used to obtain the restraint.-
Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined
-
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
-
Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get
-
-
-
-
Constructor Detail
-
IhmHydroxylRadicalFpRestraint
public IhmHydroxylRadicalFpRestraint(String name, Map<String,Column> columns)
-
IhmHydroxylRadicalFpRestraint
public IhmHydroxylRadicalFpRestraint(String name, int rowCount, Object[] encodedColumns)
-
IhmHydroxylRadicalFpRestraint
public IhmHydroxylRadicalFpRestraint(String name)
-
-
Method Detail
-
getId
public IntColumn getId()
A unique identifier for the hydroxyl radical footprinting restraint.- Returns:
- IntColumn
-
getGroupId
public IntColumn getGroupId()
An identifier to group the hydroxyl radical footprinting restraints.- Returns:
- IntColumn
-
getEntityDescription
public StrColumn getEntityDescription()
A text description of the molecular entity.- Returns:
- StrColumn
-
getEntityId
public StrColumn getEntityId()
The entity identifier. This data item is a pointer to _entity.id in the ENTITY category.- Returns:
- StrColumn
-
getAsymId
public StrColumn getAsymId()
An asym/strand identifier. This data item is a pointer to _struct_asym.id in the STRUCT_ASYM category.- Returns:
- StrColumn
-
getCompId
public StrColumn getCompId()
The component identifier for the residue. This data item is a pointer to _entity_poly_seq.mon_id in the ENTITY_POLY_SEQ category.- Returns:
- StrColumn
-
getSeqId
public IntColumn getSeqId()
The sequence index for the residue. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.- Returns:
- IntColumn
-
getFpRate
public FloatColumn getFpRate()
The footprinting rate.- Returns:
- FloatColumn
-
getFpRateError
public FloatColumn getFpRateError()
The footprinting rate error.- Returns:
- FloatColumn
-
getLogPf
public FloatColumn getLogPf()
Log (base 10) protection factor.- Returns:
- FloatColumn
-
getLogPfError
public FloatColumn getLogPfError()
Error of Log (base 10) protection factor.- Returns:
- FloatColumn
-
getPredictedSasa
public FloatColumn getPredictedSasa()
The predicted solvent accessible surface area.- Returns:
- FloatColumn
-
getDatasetListId
public IntColumn getDatasetListId()
Identifier to the hydroxyl radical footprinting dataset. This data item is a pointer to the _ihm_dataset_list.id in the IHM_DATASET_LIST category.- Returns:
- IntColumn
-
getSoftwareId
public IntColumn getSoftwareId()
Identifier to the software used to obtain the restraint. This data item is a pointer to the _software.pdbx_ordinal in the SOFTWARE category.- Returns:
- IntColumn
-
-