Class GeomAngle

  • All Implemented Interfaces:
    Category

    @Generated("org.rcsb.cif.generator.SchemaGenerator")
    public class GeomAngle
    extends BaseCategory
    Data items in the GEOM_ANGLE category record details about the bond angles as calculated from the contents of the ATOM, CELL and SYMMETRY data.
    • Constructor Detail

      • GeomAngle

        public GeomAngle​(String name,
                         int rowCount,
                         Object[] encodedColumns)
      • GeomAngle

        public GeomAngle​(String name)
    • Method Detail

      • getAtomSiteId1

        public StrColumn getAtomSiteId1()
        The identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelAltId1

        public StrColumn getAtomSiteLabelAltId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelAtomId1

        public StrColumn getAtomSiteLabelAtomId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelCompId1

        public StrColumn getAtomSiteLabelCompId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelSeqId1

        public IntColumn getAtomSiteLabelSeqId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getAtomSiteLabelAsymId1

        public StrColumn getAtomSiteLabelAsymId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteId2

        public StrColumn getAtomSiteId2()
        The identifier of the second of the three atom sites that define the angle. The second atom is taken to be the apex of the angle. This data item is a pointer to _atom_site.id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelAltId2

        public StrColumn getAtomSiteLabelAltId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelAtomId2

        public StrColumn getAtomSiteLabelAtomId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelCompId2

        public StrColumn getAtomSiteLabelCompId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelSeqId2

        public IntColumn getAtomSiteLabelSeqId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getAtomSiteLabelAsymId2

        public StrColumn getAtomSiteLabelAsymId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteId3

        public StrColumn getAtomSiteId3()
        The identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelAltId3

        public StrColumn getAtomSiteLabelAltId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_alt_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelAtomId3

        public StrColumn getAtomSiteLabelAtomId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelCompId3

        public StrColumn getAtomSiteLabelCompId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteLabelSeqId3

        public IntColumn getAtomSiteLabelSeqId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_seq_id in the ATOM_SITE category.
        Returns:
        IntColumn
      • getAtomSiteLabelAsymId3

        public StrColumn getAtomSiteLabelAsymId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.label_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthAsymId1

        public StrColumn getAtomSiteAuthAsymId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthAtomId1

        public StrColumn getAtomSiteAuthAtomId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthCompId1

        public StrColumn getAtomSiteAuthCompId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthSeqId1

        public StrColumn getAtomSiteAuthSeqId1()
        An optional identifier of the first of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthAtomId2

        public StrColumn getAtomSiteAuthAtomId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthAsymId2

        public StrColumn getAtomSiteAuthAsymId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthCompId2

        public StrColumn getAtomSiteAuthCompId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthSeqId2

        public StrColumn getAtomSiteAuthSeqId2()
        An optional identifier of the second of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthAtomId3

        public StrColumn getAtomSiteAuthAtomId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_atom_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthAsymId3

        public StrColumn getAtomSiteAuthAsymId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_asym_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthCompId3

        public StrColumn getAtomSiteAuthCompId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_comp_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getAtomSiteAuthSeqId3

        public StrColumn getAtomSiteAuthSeqId3()
        An optional identifier of the third of the three atom sites that define the angle. This data item is a pointer to _atom_site.auth_seq_id in the ATOM_SITE category.
        Returns:
        StrColumn
      • getPublFlag

        public StrColumn getPublFlag()
        This code signals whether the angle is referred to in a publication or should be placed in a table of significant angles.
        Returns:
        StrColumn
      • getSiteSymmetry1

        public StrColumn getSiteSymmetry1()
        The symmetry code of the first of the three atom sites that define the angle.
        Returns:
        StrColumn
      • getSiteSymmetry2

        public StrColumn getSiteSymmetry2()
        The symmetry code of the second of the three atom sites that define the angle.
        Returns:
        StrColumn
      • getSiteSymmetry3

        public StrColumn getSiteSymmetry3()
        The symmetry code of the third of the three atom sites that define the angle.
        Returns:
        StrColumn
      • getValue

        public FloatColumn getValue()
        Angle in degrees defined by the three sites _geom_angle.atom_site_id_1, _geom_angle.atom_site_id_2 and _geom_angle.atom_site_id_3.
        Returns:
        FloatColumn
      • getValueEsd

        public FloatColumn getValueEsd()
        The standard uncertainty (estimated standard deviation) of _geom_angle.value.
        Returns:
        FloatColumn
      • getPdbxAtomSitePDBInsCode1

        public StrColumn getPdbxAtomSitePDBInsCode1()
        Pointer to _atom_site.pdbx_PDB_ins_code.
        Returns:
        StrColumn
      • getPdbxAtomSitePDBInsCode2

        public StrColumn getPdbxAtomSitePDBInsCode2()
        Pointer to _atom_site.pdbx_PDB_ins_code.
        Returns:
        StrColumn
      • getPdbxAtomSitePDBInsCode3

        public StrColumn getPdbxAtomSitePDBInsCode3()
        Pointer to _atom_site.pdbx_PDB_ins_code.
        Returns:
        StrColumn
      • getPdbxPDBModelNum

        public IntColumn getPdbxPDBModelNum()
        Pointer to _atom_site.pdbx_PDB_model_num
        Returns:
        IntColumn