Package org.rcsb.cif.model.generated

Class EntityLink

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.EntityLink

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class EntityLink
extends BaseCategory

Data items in the ENTITY_LINK category give details about the links between entities.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
EntityLink(String name)
EntityLink(String name, int rowCount, Object[] encodedColumns)
EntityLink(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getDetails()	A description of special aspects of a link between chemical components in the structure.
StrColumn	getEntityId1()	The entity ID of the first of the two entities joined by the link.
StrColumn	getEntityId2()	The entity ID of the second of the two entities joined by the link.
IntColumn	getEntitySeqNum1()	For a polymer entity, the sequence number in the first of the two entities containing the link.
IntColumn	getEntitySeqNum2()	For a polymer entity, the sequence number in the second of the two entities containing the link.
StrColumn	getLinkId()	This data item is a pointer to _chem_link.id in the CHEM_LINK category.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

EntityLink

public EntityLink(String name,
                  Map<String,Column> columns)

EntityLink

public EntityLink(String name,
                  int rowCount,
                  Object[] encodedColumns)

EntityLink

public EntityLink(String name)

Method Detail

getLinkId

public StrColumn getLinkId()

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

Returns:

StrColumn

getDetails

public StrColumn getDetails()

A description of special aspects of a link between chemical components in the structure.

Returns:

StrColumn

getEntityId1

public StrColumn getEntityId1()

The entity ID of the first of the two entities joined by the link. This data item is a pointer to _entity.id in the ENTITY category.

Returns:

StrColumn

getEntityId2

public StrColumn getEntityId2()

The entity ID of the second of the two entities joined by the link. This data item is a pointer to _entity.id in the ENTITY category.

Returns:

StrColumn

getEntitySeqNum1

public IntColumn getEntitySeqNum1()

For a polymer entity, the sequence number in the first of the two entities containing the link. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.

Returns:

IntColumn

getEntitySeqNum2

public IntColumn getEntitySeqNum2()

For a polymer entity, the sequence number in the second of the two entities containing the link. This data item is a pointer to _entity_poly_seq.num in the ENTITY_POLY_SEQ category.

Returns:

IntColumn