Package org.rcsb.cif.model.generated

Class ChemLinkTor

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.ChemLinkTor

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class ChemLinkTor
extends BaseCategory

Data items in the CHEM_LINK_TOR category record details about the torsion angles in a link between two chemical components. As torsion angles can have more than one target value, the target values are specified in the CHEM_LINK_TOR_VALUE category.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
ChemLinkTor(String name)
ChemLinkTor(String name, int rowCount, Object[] encodedColumns)
ChemLinkTor(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAtom1CompId()	This data item indicates whether atom 1 is found in the first or the second of the two components connected by the link.
StrColumn	getAtom2CompId()	This data item indicates whether atom 2 is found in the first or the second of the two components connected by the link.
StrColumn	getAtom3CompId()	This data item indicates whether atom 3 is found in the first or the second of the two components connected by the link.
StrColumn	getAtom4CompId()	This data item indicates whether atom 4 is found in the first or the second of the two components connected by the link.
StrColumn	getAtomId1()	The ID of the first of the four atoms that define the torsion angle.
StrColumn	getAtomId2()	The ID of the second of the four atoms that define the torsion angle.
StrColumn	getAtomId3()	The ID of the third of the four atoms that define the torsion angle.
StrColumn	getAtomId4()	The ID of the fourth of the four atoms that define the torsion angle.
StrColumn	getId()	The value of _chem_link_tor.id must uniquely identify a record in the CHEM_LINK_TOR list.
StrColumn	getLinkId()	This data item is a pointer to _chem_link.id in the CHEM_LINK category.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

ChemLinkTor

public ChemLinkTor(String name,
                   Map<String,Column> columns)

ChemLinkTor

public ChemLinkTor(String name,
                   int rowCount,
                   Object[] encodedColumns)

ChemLinkTor

public ChemLinkTor(String name)

Method Detail

getAtom1CompId

public StrColumn getAtom1CompId()

This data item indicates whether atom 1 is found in the first or the second of the two components connected by the link.

Returns:

StrColumn

getAtom2CompId

public StrColumn getAtom2CompId()

This data item indicates whether atom 2 is found in the first or the second of the two components connected by the link.

Returns:

StrColumn

getAtom3CompId

public StrColumn getAtom3CompId()

This data item indicates whether atom 3 is found in the first or the second of the two components connected by the link.

Returns:

StrColumn

getAtom4CompId

public StrColumn getAtom4CompId()

This data item indicates whether atom 4 is found in the first or the second of the two components connected by the link.

Returns:

StrColumn

getAtomId1

public StrColumn getAtomId1()

The ID of the first of the four atoms that define the torsion angle. As this data item does not point to a specific atom in a specific chemical component, it is not a child in the linkage sense.

Returns:

StrColumn

getAtomId2

public StrColumn getAtomId2()

The ID of the second of the four atoms that define the torsion angle. As this data item does not point to a specific atom in a specific chemical component, it is not a child in the linkage sense.

Returns:

StrColumn

getAtomId3

public StrColumn getAtomId3()

The ID of the third of the four atoms that define the torsion angle. As this data item does not point to a specific atom in a specific chemical component, it is not a child in the linkage sense.

Returns:

StrColumn

getAtomId4

public StrColumn getAtomId4()

The ID of the fourth of the four atoms that define the torsion angle. As this data item does not point to a specific atom in a specific chemical component, it is not a child in the linkage sense.

Returns:

StrColumn

getId

public StrColumn getId()

The value of _chem_link_tor.id must uniquely identify a record in the CHEM_LINK_TOR list.

Returns:

StrColumn

getLinkId

public StrColumn getLinkId()

This data item is a pointer to _chem_link.id in the CHEM_LINK category.

Returns:

StrColumn