Class ChemLinkChirAtom

  • All Implemented Interfaces:
    Category

    @Generated("org.rcsb.cif.generator.SchemaGenerator")
    public class ChemLinkChirAtom
    extends BaseCategory
    Data items in the CHEM_LINK_CHIR_ATOM category enumerate the atoms bonded to a chiral atom in a link between two chemical components.
    • Constructor Detail

      • ChemLinkChirAtom

        public ChemLinkChirAtom​(String name,
                                int rowCount,
                                Object[] encodedColumns)
      • ChemLinkChirAtom

        public ChemLinkChirAtom​(String name)
    • Method Detail

      • getAtomCompId

        public StrColumn getAtomCompId()
        This data item indicates whether the atom bonded to a chiral atom is found in the first or the second of the two components connected by the link.
        Returns:
        StrColumn
      • getAtomId

        public StrColumn getAtomId()
        The ID of an atom bonded to the chiral atom. As this data item does not point to a specific atom in a specific chemical component, it is not a child in the linkage sense.
        Returns:
        StrColumn
      • getChirId

        public StrColumn getChirId()
        This data item is a pointer to _chem_link_chir.id in the CHEM_LINK_CHIR category.
        Returns:
        StrColumn
      • getDev

        public FloatColumn getDev()
        The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.
        Returns:
        FloatColumn