Package org.rcsb.cif.model.generated
Class ChemLinkChirAtom
- java.lang.Object
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- org.rcsb.cif.model.BaseCategory
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- org.rcsb.cif.model.generated.ChemLinkChirAtom
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- All Implemented Interfaces:
Category
@Generated("org.rcsb.cif.generator.SchemaGenerator") public class ChemLinkChirAtom extends BaseCategory
Data items in the CHEM_LINK_CHIR_ATOM category enumerate the atoms bonded to a chiral atom in a link between two chemical components.
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Field Summary
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Fields inherited from class org.rcsb.cif.model.BaseCategory
isText, textFields
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Constructor Summary
Constructors Constructor Description ChemLinkChirAtom(String name)ChemLinkChirAtom(String name, int rowCount, Object[] encodedColumns)ChemLinkChirAtom(String name, Map<String,Column> columns)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description StrColumngetAtomCompId()This data item indicates whether the atom bonded to a chiral atom is found in the first or the second of the two components connected by the link.StrColumngetAtomId()The ID of an atom bonded to the chiral atom.StrColumngetChirId()This data item is a pointer to _chem_link_chir.id in the CHEM_LINK_CHIR category.FloatColumngetDev()The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.-
Methods inherited from class org.rcsb.cif.model.BaseCategory
getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface org.rcsb.cif.model.Category
columnNames, columns, get
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Method Detail
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getAtomCompId
public StrColumn getAtomCompId()
This data item indicates whether the atom bonded to a chiral atom is found in the first or the second of the two components connected by the link.- Returns:
- StrColumn
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getAtomId
public StrColumn getAtomId()
The ID of an atom bonded to the chiral atom. As this data item does not point to a specific atom in a specific chemical component, it is not a child in the linkage sense.- Returns:
- StrColumn
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getChirId
public StrColumn getChirId()
This data item is a pointer to _chem_link_chir.id in the CHEM_LINK_CHIR category.- Returns:
- StrColumn
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getDev
public FloatColumn getDev()
The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.- Returns:
- FloatColumn
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