Package org.rcsb.cif.model.generated

Class ChemCompChirAtom

java.lang.Object

org.rcsb.cif.model.BaseCategory

org.rcsb.cif.model.generated.ChemCompChirAtom

All Implemented Interfaces:

Category

@Generated("org.rcsb.cif.generator.SchemaGenerator")
public class ChemCompChirAtom
extends BaseCategory

Data items in the CHEM_COMP_CHIR_ATOM category enumerate the atoms bonded to a chiral atom within a chemical component.

Field Summary

Fields inherited from class org.rcsb.cif.model.BaseCategory

isText, textFields

Constructor Summary

Constructors

Constructor	Description
ChemCompChirAtom(String name)
ChemCompChirAtom(String name, int rowCount, Object[] encodedColumns)
ChemCompChirAtom(String name, Map<String,Column> columns)

Method Summary

Modifier and Type	Method	Description
StrColumn	getAtomId()	The ID of an atom bonded to the chiral atom.
StrColumn	getChirId()	This data item is a pointer to _chem_comp_chir.id in the CHEM_COMP_CHIR category.
StrColumn	getCompId()	This data item is a pointer to _chem_comp.id in the CHEM_COMP category.
FloatColumn	getDev()	The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.

Methods inherited from class org.rcsb.cif.model.BaseCategory

getBinaryColumn, getCategoryName, getColumn, getColumnNames, getRowCount, isDefined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.rcsb.cif.model.Category

columnNames, columns, get

Constructor Detail

ChemCompChirAtom

public ChemCompChirAtom(String name,
                        Map<String,Column> columns)

ChemCompChirAtom

public ChemCompChirAtom(String name,
                        int rowCount,
                        Object[] encodedColumns)

ChemCompChirAtom

public ChemCompChirAtom(String name)

Method Detail

getAtomId

public StrColumn getAtomId()

The ID of an atom bonded to the chiral atom. This data item is a pointer to _chem_comp_atom.atom_id in the CHEM_COMP_ATOM category.

Returns:

StrColumn

getChirId

public StrColumn getChirId()

This data item is a pointer to _chem_comp_chir.id in the CHEM_COMP_CHIR category.

Returns:

StrColumn

getCompId

public StrColumn getCompId()

This data item is a pointer to _chem_comp.id in the CHEM_COMP category.

Returns:

StrColumn

getDev

public FloatColumn getDev()

The standard uncertainty (estimated standard deviation) of the position of this atom from the plane defined by all of the atoms in the plane.

Returns:

FloatColumn