Package org.rcsb.cif.model.builder

Class CategoryBuilder.PdbxSequencePatternBuilder

java.lang.Object

org.rcsb.cif.model.builder.CategoryBuilder

org.rcsb.cif.model.builder.CategoryBuilder.PdbxSequencePatternBuilder

Enclosing class:

CategoryBuilder

public static class CategoryBuilder.PdbxSequencePatternBuilder
extends CategoryBuilder

Nested Class Summary

Nested classes/interfaces inherited from class org.rcsb.cif.model.builder.CategoryBuilder

CategoryBuilder.AtomSiteAnisotropBuilder, CategoryBuilder.AtomSiteBuilder, CategoryBuilder.AtomSitesAltBuilder, CategoryBuilder.AtomSitesAltEnsBuilder, CategoryBuilder.AtomSitesAltGenBuilder, CategoryBuilder.AtomSitesBuilder, CategoryBuilder.AtomSitesFootnoteBuilder, CategoryBuilder.AtomTypeBuilder, CategoryBuilder.AuditAuthorBuilder, CategoryBuilder.AuditBuilder, CategoryBuilder.AuditConformBuilder, CategoryBuilder.AuditContactAuthorBuilder, CategoryBuilder.AuditLinkBuilder, CategoryBuilder.CellBuilder, CategoryBuilder.CellMeasurementBuilder, CategoryBuilder.CellMeasurementReflnBuilder, CategoryBuilder.ChemCompAngleBuilder, CategoryBuilder.ChemCompAtomBuilder, CategoryBuilder.ChemCompBondBuilder, CategoryBuilder.ChemCompBuilder, CategoryBuilder.ChemCompChirAtomBuilder, CategoryBuilder.ChemCompChirBuilder, CategoryBuilder.ChemCompLinkBuilder, CategoryBuilder.ChemCompPlaneAtomBuilder, CategoryBuilder.ChemCompPlaneBuilder, CategoryBuilder.ChemCompTorBuilder, CategoryBuilder.ChemCompTorValueBuilder, CategoryBuilder.ChemicalBuilder, CategoryBuilder.ChemicalConnAtomBuilder, CategoryBuilder.ChemicalConnBondBuilder, CategoryBuilder.ChemicalFormulaBuilder, CategoryBuilder.ChemLinkAngleBuilder, CategoryBuilder.ChemLinkBondBuilder, CategoryBuilder.ChemLinkBuilder, CategoryBuilder.ChemLinkChirAtomBuilder, CategoryBuilder.ChemLinkChirBuilder, CategoryBuilder.ChemLinkPlaneAtomBuilder, CategoryBuilder.ChemLinkPlaneBuilder, CategoryBuilder.ChemLinkTorBuilder, CategoryBuilder.ChemLinkTorValueBuilder, CategoryBuilder.CitationAuthorBuilder, CategoryBuilder.CitationBuilder, CategoryBuilder.CitationEditorBuilder, CategoryBuilder.ComputingBuilder, CategoryBuilder.Database2Builder, CategoryBuilder.DatabaseBuilder, CategoryBuilder.DatabasePDBCaveatBuilder, CategoryBuilder.DatabasePDBMatrixBuilder, CategoryBuilder.DatabasePDBRemarkBuilder, CategoryBuilder.DatabasePDBRevBuilder, CategoryBuilder.DatabasePDBRevRecordBuilder, CategoryBuilder.DatabasePDBTvectBuilder, CategoryBuilder.DiffrnAttenuatorBuilder, CategoryBuilder.DiffrnBuilder, CategoryBuilder.DiffrnDetectorBuilder, CategoryBuilder.DiffrnMeasurementBuilder, CategoryBuilder.DiffrnOrientMatrixBuilder, CategoryBuilder.DiffrnOrientReflnBuilder, CategoryBuilder.DiffrnRadiationBuilder, CategoryBuilder.DiffrnRadiationWavelengthBuilder, CategoryBuilder.DiffrnReflnBuilder, CategoryBuilder.DiffrnReflnsBuilder, CategoryBuilder.DiffrnReflnsClassBuilder, CategoryBuilder.DiffrnScaleGroupBuilder, CategoryBuilder.DiffrnSourceBuilder, CategoryBuilder.DiffrnStandardReflnBuilder, CategoryBuilder.DiffrnStandardsBuilder, CategoryBuilder.Em2dCrystalEntityBuilder, CategoryBuilder.Em2dProjectionSelectionBuilder, CategoryBuilder.Em3dCrystalEntityBuilder, CategoryBuilder.Em3dFittingBuilder, CategoryBuilder.Em3dFittingListBuilder, CategoryBuilder.Em3dReconstructionBuilder, CategoryBuilder.EmAdminBuilder, CategoryBuilder.EmAssemblyBuilder, CategoryBuilder.EmAuthorListBuilder, CategoryBuilder.EmBufferBuilder, CategoryBuilder.EmBufferComponentBuilder, CategoryBuilder.EmCrystalFormationBuilder, CategoryBuilder.EmCtfCorrectionBuilder, CategoryBuilder.EmDbReferenceAuxiliaryBuilder, CategoryBuilder.EmDbReferenceBuilder, CategoryBuilder.EmDepositorInfoBuilder, CategoryBuilder.EmDepuiBuilder, CategoryBuilder.EmDetectorBuilder, CategoryBuilder.EmDiffractionBuilder, CategoryBuilder.EmDiffractionShellBuilder, CategoryBuilder.EmDiffractionStatsBuilder, CategoryBuilder.EmEmbeddingBuilder, CategoryBuilder.EmEntityAssemblyBuilder, CategoryBuilder.EmEntityAssemblyMolwtBuilder, CategoryBuilder.EmEntityAssemblyNaturalsourceBuilder, CategoryBuilder.EmEntityAssemblyRecombinantBuilder, CategoryBuilder.EmEulerAngleAssignmentBuilder, CategoryBuilder.EmExperimentBuilder, CategoryBuilder.EmFiducialMarkersBuilder, CategoryBuilder.EmFigureDepositorInfoBuilder, CategoryBuilder.EmFinalClassificationBuilder, CategoryBuilder.EmFocusedIonBeamBuilder, CategoryBuilder.EmFscCurveBuilder, CategoryBuilder.EmGridPretreatmentBuilder, CategoryBuilder.EmHelicalEntityBuilder, CategoryBuilder.EmHighPressureFreezingBuilder, CategoryBuilder.EmImageProcessingBuilder, CategoryBuilder.EmImageRecordingBuilder, CategoryBuilder.EmImageScansBuilder, CategoryBuilder.EmImagingBuilder, CategoryBuilder.EmImagingOpticsBuilder, CategoryBuilder.EmInterpretFigureBuilder, CategoryBuilder.EmLayerLinesBuilder, CategoryBuilder.EmLayerLinesDepositorInfoBuilder, CategoryBuilder.EmMapBuilder, CategoryBuilder.EmMapDepositorInfoBuilder, CategoryBuilder.EmMaskDepositorInfoBuilder, CategoryBuilder.EmObsoleteBuilder, CategoryBuilder.EmParticleSelectionBuilder, CategoryBuilder.EmSamplePreparationBuilder, CategoryBuilder.EmSampleSupportBuilder, CategoryBuilder.EmShadowingBuilder, CategoryBuilder.EmSingleParticleEntityBuilder, CategoryBuilder.EmSoftwareBuilder, CategoryBuilder.EmSpecimenBuilder, CategoryBuilder.EmStainingBuilder, CategoryBuilder.EmStartModelBuilder, CategoryBuilder.EmStructureFactorsBuilder, CategoryBuilder.EmStructureFactorsDepositorInfoBuilder, CategoryBuilder.EmSupersedeBuilder, CategoryBuilder.EmSupportFilmBuilder, CategoryBuilder.EmTomographyBuilder, CategoryBuilder.EmTomographySpecimenBuilder, CategoryBuilder.EmUltramicrotomyBuilder, CategoryBuilder.EmVirusEntityBuilder, CategoryBuilder.EmVirusNaturalHostBuilder, CategoryBuilder.EmVirusShellBuilder, CategoryBuilder.EmVitrificationBuilder, CategoryBuilder.EmVolumeSelectionBuilder, CategoryBuilder.EntityBuilder, CategoryBuilder.EntityKeywordsBuilder, CategoryBuilder.EntityLinkBuilder, CategoryBuilder.EntityNameComBuilder, CategoryBuilder.EntityNameSysBuilder, CategoryBuilder.EntityPolyBuilder, CategoryBuilder.EntityPolySeqBuilder, CategoryBuilder.EntitySrcGenBuilder, CategoryBuilder.EntitySrcNatBuilder, CategoryBuilder.EntryBuilder, CategoryBuilder.EntryLinkBuilder, CategoryBuilder.ExptlBuilder, CategoryBuilder.ExptlCrystalBuilder, CategoryBuilder.ExptlCrystalFaceBuilder, CategoryBuilder.ExptlCrystalGrowBuilder, CategoryBuilder.ExptlCrystalGrowCompBuilder, CategoryBuilder.GeomAngleBuilder, CategoryBuilder.GeomBondBuilder, CategoryBuilder.GeomBuilder, CategoryBuilder.GeomContactBuilder, CategoryBuilder.GeomHbondBuilder, CategoryBuilder.GeomTorsionBuilder, CategoryBuilder.Ihm2demClassAverageFittingBuilder, CategoryBuilder.Ihm2demClassAverageRestraintBuilder, CategoryBuilder.Ihm3demRestraintBuilder, CategoryBuilder.IhmCrossLinkListBuilder, CategoryBuilder.IhmCrossLinkRestraintBuilder, CategoryBuilder.IhmCrossLinkResultBuilder, CategoryBuilder.IhmCrossLinkResultParametersBuilder, CategoryBuilder.IhmDatasetExternalReferenceBuilder, CategoryBuilder.IhmDatasetGroupBuilder, CategoryBuilder.IhmDatasetListBuilder, CategoryBuilder.IhmDatasetRelatedDbReferenceBuilder, CategoryBuilder.IhmDerivedDistanceRestraintBuilder, CategoryBuilder.IhmEnsembleInfoBuilder, CategoryBuilder.IhmExternalFilesBuilder, CategoryBuilder.IhmExternalReferenceInfoBuilder, CategoryBuilder.IhmFeatureListBuilder, CategoryBuilder.IhmGaussianObjEnsembleBuilder, CategoryBuilder.IhmGaussianObjSiteBuilder, CategoryBuilder.IhmGeometricObjectAxisBuilder, CategoryBuilder.IhmGeometricObjectCenterBuilder, CategoryBuilder.IhmGeometricObjectDistanceRestraintBuilder, CategoryBuilder.IhmGeometricObjectHalfTorusBuilder, CategoryBuilder.IhmGeometricObjectListBuilder, CategoryBuilder.IhmGeometricObjectPlaneBuilder, CategoryBuilder.IhmGeometricObjectSphereBuilder, CategoryBuilder.IhmGeometricObjectTorusBuilder, CategoryBuilder.IhmGeometricObjectTransformationBuilder, CategoryBuilder.IhmHydroxylRadicalFpRestraintBuilder, CategoryBuilder.IhmInterfaceResidueFeatureBuilder, CategoryBuilder.IhmLocalizationDensityFilesBuilder, CategoryBuilder.IhmModelingPostProcessBuilder, CategoryBuilder.IhmModelingProtocolBuilder, CategoryBuilder.IhmModelListBuilder, CategoryBuilder.IhmModelRepresentationBuilder, CategoryBuilder.IhmModelRepresentativeBuilder, CategoryBuilder.IhmMultiStateModelingBuilder, CategoryBuilder.IhmNonPolyFeatureBuilder, CategoryBuilder.IhmOrderedEnsembleBuilder, CategoryBuilder.IhmPolyAtomFeatureBuilder, CategoryBuilder.IhmPolyResidueFeatureBuilder, CategoryBuilder.IhmPredictedContactRestraintBuilder, CategoryBuilder.IhmPseudoSiteFeatureBuilder, CategoryBuilder.IhmRelatedDatasetsBuilder, CategoryBuilder.IhmResiduesNotModeledBuilder, CategoryBuilder.IhmSasRestraintBuilder, CategoryBuilder.IhmSphereObjSiteBuilder, CategoryBuilder.IhmStartingComparativeModelsBuilder, CategoryBuilder.IhmStartingComputationalModelsBuilder, CategoryBuilder.IhmStartingModelCoordBuilder, CategoryBuilder.IhmStartingModelDetailsBuilder, CategoryBuilder.IhmStartingModelSeqDifBuilder, CategoryBuilder.IhmStructAssemblyBuilder, CategoryBuilder.IhmStructAssemblyClassBuilder, CategoryBuilder.IhmStructAssemblyClassListBuilder, CategoryBuilder.IhmStructAssemblyDetailsBuilder, CategoryBuilder.JournalBuilder, CategoryBuilder.JournalIndexBuilder, CategoryBuilder.NdbOriginalNdbCoordinatesBuilder, CategoryBuilder.NdbStructConfNaBuilder, CategoryBuilder.NdbStructFeatureNaBuilder, CategoryBuilder.NdbStructNaBasePairBuilder, CategoryBuilder.NdbStructNaBasePairStepBuilder, CategoryBuilder.PdbxAtlasBuilder, CategoryBuilder.PdbxAtomSiteAnisoTlsBuilder, CategoryBuilder.PdbxAuditAuthorBuilder, CategoryBuilder.PdbxAuditBuilder, CategoryBuilder.PdbxAuditConformExtensionBuilder, CategoryBuilder.PdbxAuditRevisionCategoryBuilder, CategoryBuilder.PdbxAuditRevisionDetailsBuilder, CategoryBuilder.PdbxAuditRevisionGroupBuilder, CategoryBuilder.PdbxAuditRevisionHistoryBuilder, CategoryBuilder.PdbxAuditRevisionItemBuilder, CategoryBuilder.PdbxAuditSupportBuilder, CategoryBuilder.PdbxBondDistanceLimitsBuilder, CategoryBuilder.PdbxBranchSchemeBuilder, CategoryBuilder.PdbxBufferBuilder, CategoryBuilder.PdbxBufferComponentsBuilder, CategoryBuilder.PdbxChemCompAtomEditBuilder, CategoryBuilder.PdbxChemCompAtomFeatureBuilder, CategoryBuilder.PdbxChemCompAtomRelatedBuilder, CategoryBuilder.PdbxChemCompAuditBuilder, CategoryBuilder.PdbxChemCompBondEditBuilder, CategoryBuilder.PdbxChemCompDepositorInfoBuilder, CategoryBuilder.PdbxChemCompDescriptorBuilder, CategoryBuilder.PdbxChemCompFeatureBuilder, CategoryBuilder.PdbxChemCompIdentifierBuilder, CategoryBuilder.PdbxChemCompImportBuilder, CategoryBuilder.PdbxChemCompInstanceDepositorInfoBuilder, CategoryBuilder.PdbxChemCompModelAtomBuilder, CategoryBuilder.PdbxChemCompModelAuditBuilder, CategoryBuilder.PdbxChemCompModelBondBuilder, CategoryBuilder.PdbxChemCompModelBuilder, CategoryBuilder.PdbxChemCompModelDescriptorBuilder, CategoryBuilder.PdbxChemCompModelFeatureBuilder, CategoryBuilder.PdbxChemCompModelReferenceBuilder, CategoryBuilder.PdbxChemCompNonstandardBuilder, CategoryBuilder.PdbxChemCompRelatedBuilder, CategoryBuilder.PdbxChemCompSubcomponentEntityListBuilder, CategoryBuilder.PdbxChemCompSubcomponentStructConnBuilder, CategoryBuilder.PdbxChemCompSynonymsBuilder, CategoryBuilder.PdbxChemCompUploadDepositorInfoBuilder, CategoryBuilder.PdbxColumninfoBuilder, CategoryBuilder.PdbxConnectAtomBuilder, CategoryBuilder.PdbxConnectBuilder, CategoryBuilder.PdbxConnectModificationBuilder, CategoryBuilder.PdbxConnectTypeBuilder, CategoryBuilder.PdbxConstructBuilder, CategoryBuilder.PdbxConstructFeatureBuilder, CategoryBuilder.PdbxContactAuthorBuilder, CategoryBuilder.PdbxCoordBuilder, CategoryBuilder.PdbxCoordinateModelBuilder, CategoryBuilder.PdbxCrystalAlignmentBuilder, CategoryBuilder.PdbxDatabaseMessageBuilder, CategoryBuilder.PdbxDatabasePDBMasterBuilder, CategoryBuilder.PdbxDatabasePDBObsSprBuilder, CategoryBuilder.PdbxDatabasePdbOmitBuilder, CategoryBuilder.PdbxDatabaseProcBuilder, CategoryBuilder.PdbxDatabaseRelatedBuilder, CategoryBuilder.PdbxDatabaseRemarkBuilder, CategoryBuilder.PdbxDatabaseStatusBuilder, CategoryBuilder.PdbxDatabaseStatusHistoryBuilder, CategoryBuilder.PdbxDataProcessingCellBuilder, CategoryBuilder.PdbxDataProcessingDetectorBuilder, CategoryBuilder.PdbxDataProcessingReflnsBuilder, CategoryBuilder.PdbxDataProcessingStatusBuilder, CategoryBuilder.PdbxDbrefBuilder, CategoryBuilder.PdbxDccDensityBuilder, CategoryBuilder.PdbxDccDensityCorrBuilder, CategoryBuilder.PdbxDccGeometryBuilder, CategoryBuilder.PdbxDccMapBuilder, CategoryBuilder.PdbxDccMapmanBuilder, CategoryBuilder.PdbxDccRsccMapmanBuilder, CategoryBuilder.PdbxDccRsccMapmanOverallBuilder, CategoryBuilder.PdbxDepositGroupBuilder, CategoryBuilder.PdbxDepositGroupIndexBuilder, CategoryBuilder.PdbxDepositionMessageFileReferenceBuilder, CategoryBuilder.PdbxDepositionMessageInfoBuilder, CategoryBuilder.PdbxDepuiEntityFeaturesBuilder, CategoryBuilder.PdbxDepuiEntityStatusFlagsBuilder, CategoryBuilder.PdbxDepuiEntryDetailsBuilder, CategoryBuilder.PdbxDepuiStatusFlagsBuilder, CategoryBuilder.PdbxDepuiUploadBuilder, CategoryBuilder.PdbxDepuiValidationStatusFlagsBuilder, CategoryBuilder.PdbxDiffrnReflnsShellBuilder, CategoryBuilder.PdbxDistantSolventAtomsBuilder, CategoryBuilder.PdbxDomainBuilder, CategoryBuilder.PdbxDomainRangeBuilder, CategoryBuilder.PdbxDrugInfoBuilder, CategoryBuilder.PdbxEntityAssemblyBuilder, CategoryBuilder.PdbxEntityBranchBuilder, CategoryBuilder.PdbxEntityBranchLinkBuilder, CategoryBuilder.PdbxEntityBranchListBuilder, CategoryBuilder.PdbxEntityDescriptorBuilder, CategoryBuilder.PdbxEntityFuncBindModeBuilder, CategoryBuilder.PdbxEntityFuncEnzymeBuilder, CategoryBuilder.PdbxEntityFuncOtherBuilder, CategoryBuilder.PdbxEntityFuncRegulatoryBuilder, CategoryBuilder.PdbxEntityFuncStructuralBuilder, CategoryBuilder.PdbxEntityInstanceFeatureBuilder, CategoryBuilder.PdbxEntityNameBuilder, CategoryBuilder.PdbxEntityNameInstanceBuilder, CategoryBuilder.PdbxEntityNameTaxonomyBuilder, CategoryBuilder.PdbxEntityNameTaxonomyTreeBuilder, CategoryBuilder.PdbxEntityNonpolyBuilder, CategoryBuilder.PdbxEntityPolyCompLinkListBuilder, CategoryBuilder.PdbxEntityPolyDomainBuilder, CategoryBuilder.PdbxEntityPolyNaNonstandardBuilder, CategoryBuilder.PdbxEntityPolyNaTypeBuilder, CategoryBuilder.PdbxEntityPolyProteinClassBuilder, CategoryBuilder.PdbxEntityProdProtocolBuilder, CategoryBuilder.PdbxEntitySrcGenCharacterBuilder, CategoryBuilder.PdbxEntitySrcGenChromBuilder, CategoryBuilder.PdbxEntitySrcGenCloneBuilder, CategoryBuilder.PdbxEntitySrcGenCloneLigationBuilder, CategoryBuilder.PdbxEntitySrcGenCloneRecombinationBuilder, CategoryBuilder.PdbxEntitySrcGenDepositorInfoBuilder, CategoryBuilder.PdbxEntitySrcGenExpressBuilder, CategoryBuilder.PdbxEntitySrcGenExpressTimepointBuilder, CategoryBuilder.PdbxEntitySrcGenFractBuilder, CategoryBuilder.PdbxEntitySrcGenLysisBuilder, CategoryBuilder.PdbxEntitySrcGenProdDigestBuilder, CategoryBuilder.PdbxEntitySrcGenProdOtherBuilder, CategoryBuilder.PdbxEntitySrcGenProdOtherParameterBuilder, CategoryBuilder.PdbxEntitySrcGenProdPcrBuilder, CategoryBuilder.PdbxEntitySrcGenProteolysisBuilder, CategoryBuilder.PdbxEntitySrcGenPureBuilder, CategoryBuilder.PdbxEntitySrcGenRefoldBuilder, CategoryBuilder.PdbxEntitySrcSynBuilder, CategoryBuilder.PdbxEntryDetailsBuilder, CategoryBuilder.PdbxExptlCrystalCryoTreatmentBuilder, CategoryBuilder.PdbxExptlCrystalGrowCompBuilder, CategoryBuilder.PdbxExptlCrystalGrowSolBuilder, CategoryBuilder.PdbxExptlPdBuilder, CategoryBuilder.PdbxFamilyGroupIndexBuilder, CategoryBuilder.PdbxFamilyPrdAuditBuilder, CategoryBuilder.PdbxFeatureAssemblyBuilder, CategoryBuilder.PdbxFeatureDomainBuilder, CategoryBuilder.PdbxFeatureEntryBuilder, CategoryBuilder.PdbxFeatureMonomerBuilder, CategoryBuilder.PdbxFeatureSequenceRangeBuilder, CategoryBuilder.PdbxHelicalSymmetryBuilder, CategoryBuilder.PdbxHelicalSymmetryDepositorInfoBuilder, CategoryBuilder.PdbxHybridBuilder, CategoryBuilder.PdbxInhibitorInfoBuilder, CategoryBuilder.PdbxIonInfoBuilder, CategoryBuilder.PdbxLinkedEntityBuilder, CategoryBuilder.PdbxLinkedEntityInstanceListBuilder, CategoryBuilder.PdbxLinkedEntityLinkListBuilder, CategoryBuilder.PdbxLinkedEntityListBuilder, CategoryBuilder.PdbxMissingAtomNonpolyBuilder, CategoryBuilder.PdbxMissingAtomPolyBuilder, CategoryBuilder.PdbxMissingResidueListBuilder, CategoryBuilder.PdbxMoleculeBuilder, CategoryBuilder.PdbxMoleculeFeaturesBuilder, CategoryBuilder.PdbxMoleculeFeaturesDepositorInfoBuilder, CategoryBuilder.PdbxNaStrandInfoBuilder, CategoryBuilder.PdbxNaStructKeywdsBuilder, CategoryBuilder.PdbxNmrAssignedChemShiftListBuilder, CategoryBuilder.PdbxNmrChemShiftExperimentBuilder, CategoryBuilder.PdbxNmrChemShiftRefBuilder, CategoryBuilder.PdbxNmrChemShiftReferenceBuilder, CategoryBuilder.PdbxNmrChemShiftSoftwareBuilder, CategoryBuilder.PdbxNmrComputingBuilder, CategoryBuilder.PdbxNmrConstraintFileBuilder, CategoryBuilder.PdbxNmrConstraintsBuilder, CategoryBuilder.PdbxNmrDetailsBuilder, CategoryBuilder.PdbxNmrEnsembleBuilder, CategoryBuilder.PdbxNmrEnsembleRmsBuilder, CategoryBuilder.PdbxNmrExptlBuilder, CategoryBuilder.PdbxNmrExptlSampleBuilder, CategoryBuilder.PdbxNmrExptlSampleConditionsBuilder, CategoryBuilder.PdbxNmrForceConstantsBuilder, CategoryBuilder.PdbxNmrRefineBuilder, CategoryBuilder.PdbxNmrRepresentativeBuilder, CategoryBuilder.PdbxNmrSampleDetailsBuilder, CategoryBuilder.PdbxNmrSoftwareBuilder, CategoryBuilder.PdbxNmrSoftwareTaskBuilder, CategoryBuilder.PdbxNmrSpectralDimBuilder, CategoryBuilder.PdbxNmrSpectralPeakListBuilder, CategoryBuilder.PdbxNmrSpectralPeakSoftwareBuilder, CategoryBuilder.PdbxNmrSpectrometerBuilder, CategoryBuilder.PdbxNmrSystematicChemShiftOffsetBuilder, CategoryBuilder.PdbxNmrUploadBuilder, CategoryBuilder.PdbxNonpolySchemeBuilder, CategoryBuilder.PdbxNonstandardListBuilder, CategoryBuilder.PdbxPdbCompndBuilder, CategoryBuilder.PdbxPdbSourceBuilder, CategoryBuilder.PdbxPhasingDmBuilder, CategoryBuilder.PdbxPhasingDmShellBuilder, CategoryBuilder.PdbxPhasingMADSetBuilder, CategoryBuilder.PdbxPhasingMADSetShellBuilder, CategoryBuilder.PdbxPhasingMADSetSiteBuilder, CategoryBuilder.PdbxPhasingMADShellBuilder, CategoryBuilder.PdbxPhasingMRBuilder, CategoryBuilder.PdbxPointSymmetryBuilder, CategoryBuilder.PdbxPointSymmetryDepositorInfoBuilder, CategoryBuilder.PdbxPolySeqSchemeBuilder, CategoryBuilder.PdbxPostProcessDetailsBuilder, CategoryBuilder.PdbxPostProcessStatusBuilder, CategoryBuilder.PdbxPrdAuditBuilder, CategoryBuilder.PdbxPrereleaseSeqBuilder, CategoryBuilder.PdbxProteinInfoBuilder, CategoryBuilder.PdbxReferenceEntityLinkBuilder, CategoryBuilder.PdbxReferenceEntityListBuilder, CategoryBuilder.PdbxReferenceEntityNonpolyBuilder, CategoryBuilder.PdbxReferenceEntityPolyBuilder, CategoryBuilder.PdbxReferenceEntityPolyLinkBuilder, CategoryBuilder.PdbxReferenceEntityPolySeqBuilder, CategoryBuilder.PdbxReferenceEntitySequenceBuilder, CategoryBuilder.PdbxReferenceEntitySrcNatBuilder, CategoryBuilder.PdbxReferenceEntitySubcomponentsBuilder, CategoryBuilder.PdbxReferenceLinkedEntityBuilder, CategoryBuilder.PdbxReferenceLinkedEntityCompLinkBuilder, CategoryBuilder.PdbxReferenceLinkedEntityCompListBuilder, CategoryBuilder.PdbxReferenceLinkedEntityLinkBuilder, CategoryBuilder.PdbxReferenceMoleculeAnnotationBuilder, CategoryBuilder.PdbxReferenceMoleculeBuilder, CategoryBuilder.PdbxReferenceMoleculeDetailsBuilder, CategoryBuilder.PdbxReferenceMoleculeFamilyBuilder, CategoryBuilder.PdbxReferenceMoleculeFeaturesBuilder, CategoryBuilder.PdbxReferenceMoleculeListBuilder, CategoryBuilder.PdbxReferenceMoleculeRelatedStructuresBuilder, CategoryBuilder.PdbxReferenceMoleculeSynonymsBuilder, CategoryBuilder.PdbxReferencePublicationListBuilder, CategoryBuilder.PdbxRefineAuxFileBuilder, CategoryBuilder.PdbxRefineBuilder, CategoryBuilder.PdbxRefineComponentBuilder, CategoryBuilder.PdbxRefineLsRestrNcsBuilder, CategoryBuilder.PdbxRefineTlsBuilder, CategoryBuilder.PdbxRefineTlsGroupBuilder, CategoryBuilder.PdbxReflnsTwinBuilder, CategoryBuilder.PdbxRelatedExpDataSetBuilder, CategoryBuilder.PdbxRemediationAtomSiteMappingBuilder, CategoryBuilder.PdbxReRefinementBuilder, CategoryBuilder.PdbxRmchOutlierBuilder, CategoryBuilder.PdbxRmsDevsCovalentBuilder, CategoryBuilder.PdbxRmsDevsCovByMonomerBuilder, CategoryBuilder.PdbxRobotSystemBuilder, CategoryBuilder.PdbxSeqMapDepositorInfoBuilder, CategoryBuilder.PdbxSequenceAnnotationBuilder, CategoryBuilder.PdbxSequencePatternBuilder, CategoryBuilder.PdbxSequenceRangeBuilder, CategoryBuilder.PdbxSerialCrystallographyDataReductionBuilder, CategoryBuilder.PdbxSerialCrystallographyMeasurementBuilder, CategoryBuilder.PdbxSerialCrystallographySampleDeliveryBuilder, CategoryBuilder.PdbxSerialCrystallographySampleDeliveryFixedTargetBuilder, CategoryBuilder.PdbxSerialCrystallographySampleDeliveryInjectionBuilder, CategoryBuilder.PdbxSGProjectBuilder, CategoryBuilder.PdbxSolnScatterBuilder, CategoryBuilder.PdbxSolnScatterModelBuilder, CategoryBuilder.PdbxSolventAtomSiteMappingBuilder, CategoryBuilder.PdbxSolventInfoBuilder, CategoryBuilder.PdbxSourceBuilder, CategoryBuilder.PdbxStereochemistryBuilder, CategoryBuilder.PdbxStructAssemblyAuthClassificationBuilder, CategoryBuilder.PdbxStructAssemblyAuthEvidenceBuilder, CategoryBuilder.PdbxStructAssemblyAuthEvidenceDepositorInfoBuilder, CategoryBuilder.PdbxStructAssemblyBuilder, CategoryBuilder.PdbxStructAssemblyDepositorInfoBuilder, CategoryBuilder.PdbxStructAssemblyGenBuilder, CategoryBuilder.PdbxStructAssemblyGenDepositorInfoBuilder, CategoryBuilder.PdbxStructAssemblyPropBuilder, CategoryBuilder.PdbxStructAssemblyPropDepositorInfoBuilder, CategoryBuilder.PdbxStructAsymGenBuilder, CategoryBuilder.PdbxStructBiolFuncBuilder, CategoryBuilder.PdbxStructChemCompDiagnosticsBuilder, CategoryBuilder.PdbxStructChemCompFeatureBuilder, CategoryBuilder.PdbxStructConnAngleBuilder, CategoryBuilder.PdbxStructEntityInstBuilder, CategoryBuilder.PdbxStructGroupComponentRangeBuilder, CategoryBuilder.PdbxStructGroupComponentsBuilder, CategoryBuilder.PdbxStructGroupListBuilder, CategoryBuilder.PdbxStructInfoBuilder, CategoryBuilder.PdbxStructLegacyOperListBuilder, CategoryBuilder.PdbxStructLinkBuilder, CategoryBuilder.PdbxStructModResidueBuilder, CategoryBuilder.PdbxStructMsymGenBuilder, CategoryBuilder.PdbxStructNcsVirusGenBuilder, CategoryBuilder.PdbxStructOperListBuilder, CategoryBuilder.PdbxStructOperListDepositorInfoBuilder, CategoryBuilder.PdbxStructPackGenBuilder, CategoryBuilder.PdbxStructRefSeqDeletionBuilder, CategoryBuilder.PdbxStructRefSeqDepositorInfoBuilder, CategoryBuilder.PdbxStructRefSeqDifDepositorInfoBuilder, CategoryBuilder.PdbxStructRefSeqFeatureBuilder, CategoryBuilder.PdbxStructRefSeqFeaturePropBuilder, CategoryBuilder.PdbxStructRefSeqInsertionBuilder, CategoryBuilder.PdbxStructSheetHbondBuilder, CategoryBuilder.PdbxStructSpecialSymmetryBuilder, CategoryBuilder.PdbxSugarPhosphateGeometryBuilder, CategoryBuilder.PdbxSummaryFlagsBuilder, CategoryBuilder.PdbxSupportingExpDataSetBuilder, CategoryBuilder.PdbxTableinfoBuilder, CategoryBuilder.PdbxTrnaInfoBuilder, CategoryBuilder.PdbxUnobsOrZeroOccAtomsBuilder, CategoryBuilder.PdbxUnobsOrZeroOccResiduesBuilder, CategoryBuilder.PdbxUnpairBuilder, CategoryBuilder.PdbxValAngleBuilder, CategoryBuilder.PdbxValBondBuilder, CategoryBuilder.PdbxValChiralBuilder, CategoryBuilder.PdbxValContactBuilder, CategoryBuilder.PdbxValidateChiralBuilder, CategoryBuilder.PdbxValidateCloseContactBuilder, CategoryBuilder.PdbxValidateMainChainPlaneBuilder, CategoryBuilder.PdbxValidatePeptideOmegaBuilder, CategoryBuilder.PdbxValidatePlanesAtomBuilder, CategoryBuilder.PdbxValidatePlanesBuilder, CategoryBuilder.PdbxValidatePolymerLinkageBuilder, CategoryBuilder.PdbxValidateRmsdAngleBuilder, CategoryBuilder.PdbxValidateRmsdBondBuilder, CategoryBuilder.PdbxValidateSymmContactBuilder, CategoryBuilder.PdbxValidateTorsionBuilder, CategoryBuilder.PdbxValSymContactBuilder, CategoryBuilder.PdbxVersionBuilder, CategoryBuilder.PdbxViewCategoryBuilder, CategoryBuilder.PdbxViewCategoryGroupBuilder, CategoryBuilder.PdbxViewItemBuilder, CategoryBuilder.PdbxVirtualAngleBuilder, CategoryBuilder.PdbxVirtualBondBuilder, CategoryBuilder.PdbxVirtualTorsionBuilder, CategoryBuilder.PdbxXplorFileBuilder, CategoryBuilder.PhasingAveragingBuilder, CategoryBuilder.PhasingBuilder, CategoryBuilder.PhasingIsomorphousBuilder, CategoryBuilder.PhasingMADBuilder, CategoryBuilder.PhasingMADClustBuilder, CategoryBuilder.PhasingMADExptBuilder, CategoryBuilder.PhasingMADRatioBuilder, CategoryBuilder.PhasingMADSetBuilder, CategoryBuilder.PhasingMIRBuilder, CategoryBuilder.PhasingMIRDerBuilder, CategoryBuilder.PhasingMIRDerReflnBuilder, CategoryBuilder.PhasingMIRDerShellBuilder, CategoryBuilder.PhasingMIRDerSiteBuilder, CategoryBuilder.PhasingMIRShellBuilder, CategoryBuilder.PhasingSetBuilder, CategoryBuilder.PhasingSetReflnBuilder, CategoryBuilder.PublAuthorBuilder, CategoryBuilder.PublBodyBuilder, CategoryBuilder.PublBuilder, CategoryBuilder.PublManuscriptInclBuilder, CategoryBuilder.RefineAnalyzeBuilder, CategoryBuilder.RefineBIsoBuilder, CategoryBuilder.RefineBuilder, CategoryBuilder.RefineFunctMinimizedBuilder, CategoryBuilder.RefineHistBuilder, CategoryBuilder.RefineLsClassBuilder, CategoryBuilder.RefineLsRestrBuilder, CategoryBuilder.RefineLsRestrNcsBuilder, CategoryBuilder.RefineLsRestrTypeBuilder, CategoryBuilder.RefineLsShellBuilder, CategoryBuilder.RefineOccupancyBuilder, CategoryBuilder.ReflnBuilder, CategoryBuilder.ReflnsBuilder, CategoryBuilder.ReflnsClassBuilder, CategoryBuilder.ReflnsScaleBuilder, CategoryBuilder.ReflnsShellBuilder, CategoryBuilder.ReflnSysAbsBuilder, CategoryBuilder.SoftwareBuilder, CategoryBuilder.SpaceGroupBuilder, CategoryBuilder.SpaceGroupSymopBuilder, CategoryBuilder.StructAsymBuilder, CategoryBuilder.StructBiolBuilder, CategoryBuilder.StructBiolGenBuilder, CategoryBuilder.StructBiolKeywordsBuilder, CategoryBuilder.StructBiolViewBuilder, CategoryBuilder.StructBuilder, CategoryBuilder.StructConfBuilder, CategoryBuilder.StructConfTypeBuilder, CategoryBuilder.StructConnBuilder, CategoryBuilder.StructConnTypeBuilder, CategoryBuilder.StructKeywordsBuilder, CategoryBuilder.StructMonDetailsBuilder, CategoryBuilder.StructMonNuclBuilder, CategoryBuilder.StructMonProtBuilder, CategoryBuilder.StructMonProtCisBuilder, CategoryBuilder.StructNcsDomBuilder, CategoryBuilder.StructNcsDomLimBuilder, CategoryBuilder.StructNcsEnsBuilder, CategoryBuilder.StructNcsEnsGenBuilder, CategoryBuilder.StructNcsOperBuilder, CategoryBuilder.StructRefBuilder, CategoryBuilder.StructRefSeqBuilder, CategoryBuilder.StructRefSeqDifBuilder, CategoryBuilder.StructSheetBuilder, CategoryBuilder.StructSheetHbondBuilder, CategoryBuilder.StructSheetOrderBuilder, CategoryBuilder.StructSheetRangeBuilder, CategoryBuilder.StructSheetTopologyBuilder, CategoryBuilder.StructSiteBuilder, CategoryBuilder.StructSiteGenBuilder, CategoryBuilder.StructSiteKeywordsBuilder, CategoryBuilder.StructSiteViewBuilder, CategoryBuilder.SymmetryBuilder, CategoryBuilder.SymmetryEquivBuilder, CategoryBuilder.ValenceParamBuilder, CategoryBuilder.ValenceRefBuilder

Constructor Summary

Constructors

Constructor	Description
PdbxSequencePatternBuilder(BlockBuilder parent)

Method Summary

Modifier and Type	Method	Description
StrColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder>	enterAuthAsymId()
StrColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder>	enterLabelAsymId()
IntColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder>	enterPatternCount()
StrColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder>	enterSequencePattern()

Methods inherited from class org.rcsb.cif.model.builder.CategoryBuilder

addColumn, build, enterFloatColumn, enterIntColumn, enterStrColumn, leaveCategory

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PdbxSequencePatternBuilder

public PdbxSequencePatternBuilder(BlockBuilder parent)

Method Detail

enterLabelAsymId

public StrColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder> enterLabelAsymId()

enterAuthAsymId

public StrColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder> enterAuthAsymId()

enterPatternCount

public IntColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder> enterPatternCount()

enterSequencePattern

public StrColumnBuilder<CategoryBuilder.PdbxSequencePatternBuilder> enterSequencePattern()