Uses of Class
ome.codecs.CodecOptions

Packages that use CodecOptions

Package	Description
ome.codecs	Package containing Bio-Formats compression and decompression logic.

Uses of CodecOptions in ome.codecs

Subclasses of CodecOptions in ome.codecs

Modifier and Type	Class and Description
class	HuffmanCodecOptions Options for compressing and decompressing Huffman data.
class	JPEG2000CodecOptions Options for compressing and decompressing JPEG-2000 data.
class	MJPBCodecOptions Options for compressing and decompressing MJPB data.

Methods in ome.codecs that return CodecOptions

Modifier and Type	Method and Description
static CodecOptions	CodecOptions.getDefaultOptions() Return CodecOptions with reasonable default values.

Methods in ome.codecs with parameters of type CodecOptions

Modifier and Type	Method and Description
byte[]	Codec.compress(byte[][] data, CodecOptions options) Compresses a block of data.
byte[]	BaseCodec.compress(byte[][] data, CodecOptions options) 2D data block encoding default implementation.
byte[]	JPEGCodec.compress(byte[] data, CodecOptions options) The CodecOptions parameter should have the following fields set: width height channels bitsPerSample interleaved littleEndian signed
byte[]	MJPBCodec.compress(byte[] data, CodecOptions options)
byte[]	PackbitsCodec.compress(byte[] data, CodecOptions options)
byte[]	Codec.compress(byte[] data, CodecOptions options) Compresses a block of data.
byte[]	HuffmanCodec.compress(byte[] data, CodecOptions options)
byte[]	MSRLECodec.compress(byte[] data, CodecOptions options)
byte[]	JPEG2000Codec.compress(byte[] data, CodecOptions options) The CodecOptions parameter should have the following fields set: width height bitsPerSample channels interleaved littleEndian lossless
byte[]	LosslessJPEGCodec.compress(byte[] data, CodecOptions options)
byte[]	MSVideoCodec.compress(byte[] data, CodecOptions options)
byte[]	PassthroughCodec.compress(byte[] data, CodecOptions options)
byte[]	ZstdCodec.compress(byte[] data, CodecOptions options)
byte[]	QTRLECodec.compress(byte[] data, CodecOptions options)
byte[]	LZOCodec.compress(byte[] data, CodecOptions options)
byte[]	Base64Codec.compress(byte[] input, CodecOptions options)
byte[]	RPZACodec.compress(byte[] input, CodecOptions options)
byte[]	LZWCodec.compress(byte[] input, CodecOptions options)
byte[]	ZlibCodec.compress(byte[] data, CodecOptions options)
byte[]	LZ4Codec.compress(byte[] data, CodecOptions options)
ByteBuffer	Codec.compress(ByteBuffer target, byte[] data, CodecOptions options) Compresses data from an array into a ByteBuffer.
ByteBuffer	LZWCodec.compress(ByteBuffer output, byte[] input, CodecOptions options)
ByteBuffer	BaseCodec.compress(ByteBuffer target, byte[] data, CodecOptions options) Compress using ByteBuffers.
byte[]	Codec.decompress(byte[][] data, CodecOptions options) Decompresses a block of data.
byte[]	BaseCodec.decompress(byte[][] data, CodecOptions options) 2D data block decoding default implementation.
byte[]	Codec.decompress(byte[] data, CodecOptions options) Decompresses a block of data.
byte[]	JPEG2000Codec.decompress(byte[] buf, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	PassthroughCodec.decompress(byte[] data, CodecOptions options)
byte[]	ZstdCodec.decompress(byte[] data, CodecOptions options)
byte[]	QTRLECodec.decompress(byte[] data, CodecOptions options) The CodecOptions parameter should have the following fields set: width height bitsPerSample previousImage
byte[]	BaseCodec.decompress(byte[] data, CodecOptions options)
byte[]	LZ4Codec.decompress(byte[] data, CodecOptions options)
byte[]	JPEGCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	MJPBCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter must be an instance of MJPBCodecOptions, and should have the following fields set: interlaced width height bitsPerSample littleEndian interleaved
byte[]	PackbitsCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: maxBytes
byte[]	Codec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) Decompresses data from the given RandomAccessInputStream.
byte[]	HuffmanCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter must be an instance of HuffmanCodecOptions, and should have the following fields set: table bitsPerSample maxBytes
byte[]	MSRLECodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: width height previousImage
byte[]	JPEG2000Codec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	LosslessJPEGCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: interleaved littleEndian
byte[]	MSVideoCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: width height bitsPerSample previousImage
byte[]	PassthroughCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
byte[]	ZstdCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
byte[]	QTRLECodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
byte[]	LZOCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
byte[]	Base64Codec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
byte[]	RPZACodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: width height
byte[]	LZWCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options) The CodecOptions parameter should have the following fields set: maxBytes
byte[]	ZlibCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
abstract byte[]	BaseCodec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
byte[]	LZ4Codec.decompress(loci.common.RandomAccessInputStream in, CodecOptions options)
static JPEG2000CodecOptions	JPEG2000CodecOptions.getDefaultOptions(CodecOptions options) Return JPEG2000CodecOptions using the given CodecOptions as the default.
int	HuffmanCodec.getSample(BitBuffer bb, CodecOptions options) Deprecated.
int	HuffmanCodec.getSample(loci.common.RandomAccessInputStream bb, CodecOptions options)

Constructors in ome.codecs with parameters of type CodecOptions

Constructor and Description
CodecOptions(CodecOptions options) Construct a new CodecOptions using the given CodecOptions.
JPEG2000CodecOptions(CodecOptions options) Creates a new instance with options.