<?xml version="1.0"?>
<!--
  ~ Copyright 2015-2017 OpenCB
  ~
  ~ Licensed under the Apache License, Version 2.0 (the "License");
  ~ you may not use this file except in compliance with the License.
  ~ You may obtain a copy of the License at
  ~
  ~     http://www.apache.org/licenses/LICENSE-2.0
  ~
  ~ Unless required by applicable law or agreed to in writing, software
  ~ distributed under the License is distributed on an "AS IS" BASIS,
  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ~ See the License for the specific language governing permissions and
  ~ limitations under the License.
  -->

<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
    <modelVersion>4.0.0</modelVersion>

    <parent>
        <groupId>org.opencb.biodata</groupId>
        <artifactId>biodata</artifactId>
        <version>2.2.2</version>
        <relativePath>../pom.xml</relativePath>
    </parent>

    <artifactId>biodata-tools</artifactId>
    <version>${biodata.version}</version>
    <packaging>jar</packaging>

    <dependencies>
        <dependency>
            <groupId>org.opencb.biodata</groupId>
            <artifactId>biodata-formats</artifactId>
        </dependency>
        <dependency>
            <groupId>org.opencb.commons</groupId>
            <artifactId>commons-datastore-core</artifactId>
        </dependency>
        <dependency>
            <groupId>org.opencb.ga4gh</groupId>
            <artifactId>ga4gh</artifactId>
            <version>0.6.0a5</version>
        </dependency>

        <dependency>
            <groupId>log4j</groupId>
            <artifactId>log4j</artifactId>
            <version>1.2.17</version>
        </dependency>
        <dependency>
            <groupId>com.databricks</groupId>
            <artifactId>SnpEff</artifactId>
            <version>4.3.1</version>
            <exclusions>
                <exclusion>
                    <groupId>junit</groupId>
                    <artifactId>junit</artifactId>
                </exclusion>
            </exclusions>
        </dependency>
        <dependency>
            <groupId>org.rocksdb</groupId>
            <artifactId>rocksdbjni</artifactId>
            <version>4.5.1</version>
        </dependency>
        <dependency>
            <groupId>org.biojava</groupId>
            <artifactId>biojava-alignment</artifactId>
        </dependency>
        <dependency>
            <groupId>org.opencb.biodata</groupId>
            <artifactId>biodata-models</artifactId>
            <version>${biodata.version}</version>
            <type>test-jar</type>
            <scope>test</scope>
        </dependency>
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
            <scope>test</scope>
        </dependency>
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-simple</artifactId>
            <scope>test</scope>
        </dependency>
    </dependencies>

</project>
