<?xml version="1.0"?>
<!--
  ~ Copyright 2015 OpenCB
  ~
  ~ Licensed under the Apache License, Version 2.0 (the "License");
  ~ you may not use this file except in compliance with the License.
  ~ You may obtain a copy of the License at
  ~
  ~     http://www.apache.org/licenses/LICENSE-2.0
  ~
  ~ Unless required by applicable law or agreed to in writing, software
  ~ distributed under the License is distributed on an "AS IS" BASIS,
  ~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ~ See the License for the specific language governing permissions and
  ~ limitations under the License.
  -->

<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
    <modelVersion>4.0.0</modelVersion>

    <parent>
        <groupId>org.opencb.biodata</groupId>
        <artifactId>biodata</artifactId>
        <version>0.7.3</version>
        <relativePath>../pom.xml</relativePath>
    </parent>

    <groupId>org.opencb.biodata</groupId>
    <artifactId>biodata-tools</artifactId>
    <version>${biodata.version}</version>

    <dependencies>
        <dependency>
            <groupId>org.opencb.biodata</groupId>
            <artifactId>biodata-models</artifactId>
        </dependency>
        <dependency>
            <groupId>org.opencb.biodata</groupId>
            <artifactId>biodata-formats</artifactId>
        </dependency>
        <dependency>
            <groupId>org.opencb.commons</groupId>
            <artifactId>commons-lib</artifactId>
        </dependency>

        <dependency>
            <groupId>org.opencb.ga4gh</groupId>
            <artifactId>ga4gh</artifactId>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.core</groupId>
            <artifactId>jackson-databind</artifactId>
        </dependency>
        <dependency>
            <groupId>com.google.guava</groupId>
            <artifactId>guava</artifactId>
        </dependency>
        <dependency>
            <groupId>org.rocksdb</groupId>
            <artifactId>rocksdbjni</artifactId>
            <version>4.1.0</version>
        </dependency>
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
        </dependency>
    </dependencies>

    <build>
        <plugins>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-compiler-plugin</artifactId>
                <version>3.2</version>
                <configuration>
                    <source>${compileSource}</source>
                    <target>${compileSource}</target>
                    <excludes>
                        <exclude>**/VariantEVSControlAnnotator.java</exclude>
                    </excludes>
                    <testExcludes>
                        <exclude>**/EffectCalculatorTest.java</exclude>
                        <exclude>**/VariantGeneNameAnnotatorTest.java</exclude>
                    </testExcludes>
                </configuration>
            </plugin>
        </plugins>
    </build>
</project>
