4.0.0 pom org.nmdp.ngs ngs-multimodule 1.7 ngs-multimodule Next generation sequencing (NGS/HTS) multi-module build. https://github.com/nmdp-bioinformatics/ngs 2014 scm:git:git@github.com:nmdp-bioinformatics/ngs.git scm:git:git@github.com:nmdp-bioinformatics/ngs.git git@github.com:nmdp-bioinformatics/ngs.git ngs-multimodule-1.7 GNU Lesser General Public License (LGPL) http://www.gnu.org/licenses/lgpl.html repo ckennedy-nmdp Caleb Kennedy dvaliga Dan Valiga mheuer-nmdp Michael Heuer (NMDP) ossrh https://oss.sonatype.org/content/repositories/snapshots ossrh https://oss.sonatype.org/service/local/staging/deploy/maven2/ align feature gtr hml range reads sra tools variant xjc-plugins 1.9.2 1.7 1.7 [1.7,) [3.0.4,) UTF-8 UTF-8 com.github.davidmoten rtree 0.4.1 com.google.guava guava 18.0 com.google.inject guice 3.0 com.google.code.findbugs jsr305 2.0.3 junit junit 4.11 org.apache.commons commons-math3 3.3 org.biojava alignment ${biojava.version} org.biojava core ${biojava.version} commons-dbcp commons-dbcp commons-pool commons-pool org.biojava sequencing ${biojava.version} org.dishevelled dsh-commandline 1.1 org.dishevelled dsh-compress 1.0 org.seqdoop htsjdk 1.118 commons-logging commons-logging org.apache.ant ant-launcher org.apache.bcel bcel org.apache.commons commons-jexl org.seqdoop cofoja org.testng testng org.xerial.snappy snappy-java jdeb org.vafer 1.3 org.apache.cxf cxf-xjc-plugin 3.0.2 org.apache.maven.plugins maven-archetype-plugin 2.2 org.apache.maven.plugins maven-assembly-plugin 2.5.1 org.apache.maven.plugins maven-clean-plugin 2.6.1 org.apache.maven.plugins maven-compiler-plugin 3.2 ${maven.compile.source} ${maven.compile.target} org.apache.maven.plugins maven-deploy-plugin 2.8.2 org.apache.maven.plugins maven-enforcer-plugin 1.3.1 org.apache.maven.plugins maven-failsafe-plugin 2.17 org.apache.maven.plugins maven-gpg-plugin 1.5 org.apache.maven.plugins maven-install-plugin 2.5.2 org.apache.maven.plugins maven-jar-plugin 2.5 org.apache.maven.plugins maven-javadoc-plugin 2.9.1 true true ${maven.compile.source} true org.apache.maven.plugins maven-release-plugin 2.5.1 true false release deploy org.apache.maven.plugins maven-resources-plugin 2.7 org.apache.maven.plugins maven-site-plugin 3.4 org.apache.maven.plugins maven-source-plugin 2.4 org.apache.maven.plugins maven-surefire-plugin 2.18 org.codehaus.mojo appassembler-maven-plugin 1.8.1 org.codehaus.mojo clirr-maven-plugin 2.6.1 org.codehaus.mojo javacc-maven-plugin 2.6 org.codehaus.mojo templating-maven-plugin 1.0-alpha-3 org.codehaus.mojo xml-maven-plugin 1.0 pl.project13.maven git-commit-id-plugin 2.1.11 org.apache.maven.plugins maven-enforcer-plugin enforce-java enforce ${maven.enforcer.maven-version} ${maven.enforcer.jdk-version} release org.apache.maven.plugins maven-gpg-plugin sign-artifacts verify sign org.apache.maven.plugins maven-javadoc-plugin attach-javadocs jar org.apache.maven.plugins maven-source-plugin attach-sources jar-no-fork