4.0.0 jar org.dishevelled dsh-bio 1.2 dsh-bio-tools dsh-bio-tools Command line tools. org.dishevelled dsh-bio-align ${project.version} org.dishevelled dsh-bio-alignment ${project.version} org.dishevelled dsh-bio-assembly ${project.version} org.dishevelled dsh-bio-feature ${project.version} org.dishevelled dsh-bio-range ${project.version} org.dishevelled dsh-bio-read ${project.version} org.dishevelled dsh-bio-variant ${project.version} com.github.davidmoten rtree compile com.google.code.findbugs jsr305 compile com.google.guava guava compile commons-io commons-io compile junit junit test org.apache.commons commons-csv compile org.apache.commons commons-math3 compile org.biojava alignment compile org.biojava core compile org.biojava sequencing compile org.dishevelled dsh-commandline compile org.dishevelled dsh-compress compile org.dishevelled dsh-bio-align compile org.dishevelled dsh-bio-alignment compile org.dishevelled dsh-bio-assembly compile org.dishevelled dsh-bio-feature compile org.dishevelled dsh-bio-range compile org.dishevelled dsh-bio-read compile org.dishevelled dsh-bio-variant compile org.codehaus.mojo templating-maven-plugin filter-src filter-sources pl.project13.maven git-commit-id-plugin revision org.codehaus.mojo appassembler-maven-plugin flat lib dsh-compress-bed org.dishevelled.bio.tools.CompressBed dsh-compress-fastq org.dishevelled.bio.tools.CompressFastq dsh-compress-gff3 org.dishevelled.bio.tools.CompressGff3 dsh-compress-vcf org.dishevelled.bio.tools.CompressVcf dsh-compress-sam org.dishevelled.bio.tools.CompressSam dsh-disinterleave-fastq org.dishevelled.bio.tools.DisinterleaveFastq dsh-downsample-fastq org.dishevelled.bio.tools.DownsampleFastq dsh-downsample-interleaved-fastq org.dishevelled.bio.tools.DownsampleInterleavedFastq dsh-extract-fastq org.dishevelled.bio.tools.ExtractFastq dsh-extract-fastq-by-length org.dishevelled.bio.tools.ExtractFastqByLength dsh-fasta-to-fastq org.dishevelled.bio.tools.FastaToFastq dsh-fastq-description org.dishevelled.bio.tools.FastqDescription dsh-fastq-sequence-length org.dishevelled.bio.tools.FastqSequenceLength dsh-fastq-to-fasta org.dishevelled.bio.tools.FastqToFasta dsh-filter-bed org.dishevelled.bio.tools.FilterBed dsh-filter-gff3 org.dishevelled.bio.tools.FilterGff3 dsh-filter-sam org.dishevelled.bio.tools.FilterSam dsh-filter-vcf org.dishevelled.bio.tools.FilterVcf dsh-gfa1-to-gfa2 org.dishevelled.bio.tools.Gfa1ToGfa2 dsh-interleave-fastq org.dishevelled.bio.tools.InterleaveFastq dsh-intersect-bed org.dishevelled.bio.tools.IntersectBed dsh-remap-phase-set org.dishevelled.bio.tools.RemapPhaseSet dsh-rename-references org.dishevelled.bio.tools.RenameReferences dsh-split-bed org.dishevelled.bio.tools.SplitBed dsh-split-fasta org.dishevelled.bio.tools.SplitFasta dsh-split-fastq org.dishevelled.bio.tools.SplitFastq dsh-split-gff3 org.dishevelled.bio.tools.SplitGff3 dsh-split-interleaved-fastq org.dishevelled.bio.tools.SplitInterleavedFastq dsh-split-sam org.dishevelled.bio.tools.SplitSam dsh-split-vcf org.dishevelled.bio.tools.SplitVcf dsh-variant-table-to-vcf org.dishevelled.bio.tools.EnsemblVariantTableToVcf dsh-vcf-header org.dishevelled.bio.tools.VcfHeader dsh-vcf-pedigree org.dishevelled.bio.tools.VcfPedigree dsh-vcf-samples org.dishevelled.bio.tools.VcfSamples dsh-bio org.dishevelled.bio.tools.Tools package assemble org.apache.maven.plugins maven-assembly-plugin src/main/assembly/assembly.xml posix package single org.codehaus.mojo build-helper-maven-plugin timestamp-property timestamp-property build-helper-maven-plugin.build.timestamp yyyy-MM-dd en_US