org.forester.ws.seqdb

Interface SequenceDatabaseEntry

All Known Implementing Classes:

EbiDbEntry, UniProtEntry

public interface SequenceDatabaseEntry

Method Summary

Modifier and Type	Method and Description
String	getAccession()
SortedSet<Annotation>	getAnnotations()
String	getChromosome()
SortedSet<Accession>	getCrossReferences()
String	getGeneName()
SortedSet<GoTerm>	getGoTerms()
String	getMap()
MolecularSequence	getMolecularSequence()
String	getProvider()
String	getSequenceName()
String	getSequenceSymbol()
String	getTaxonomyIdentifier()
String	getTaxonomyScientificName()
boolean	isEmpty()

Method Detail

getAccession

String getAccession()

getGeneName

String getGeneName()

getGoTerms

SortedSet<GoTerm> getGoTerms()

getAnnotations

SortedSet<Annotation> getAnnotations()

getProvider

String getProvider()

getSequenceName

String getSequenceName()

getSequenceSymbol

String getSequenceSymbol()

getTaxonomyIdentifier

String getTaxonomyIdentifier()

getTaxonomyScientificName

String getTaxonomyScientificName()

isEmpty

boolean isEmpty()

getCrossReferences

SortedSet<Accession> getCrossReferences()

getMap

String getMap()

getChromosome

String getChromosome()

getMolecularSequence

MolecularSequence getMolecularSequence()