Uses of Class
org.forester.sequence.MolecularSequence.TYPE

Packages that use MolecularSequence.TYPE

Package	Description
org.forester.msa
org.forester.sequence
org.forester.util

Uses of MolecularSequence.TYPE in org.forester.msa

Methods in org.forester.msa that return MolecularSequence.TYPE

Modifier and Type	Method and Description
MolecularSequence.TYPE	BasicMsa.getType()
MolecularSequence.TYPE	Msa.getType()

Constructors in org.forester.msa with parameters of type MolecularSequence.TYPE

Constructor and Description
BasicMsa(int rows, int columns, MolecularSequence.TYPE type)

Uses of MolecularSequence.TYPE in org.forester.sequence

Methods in org.forester.sequence that return MolecularSequence.TYPE

Modifier and Type	Method and Description
MolecularSequence.TYPE	MolecularSequence.getType()
MolecularSequence.TYPE	BasicSequence.getType()
static MolecularSequence.TYPE	MolecularSequence.TYPE.valueOf(String name) Returns the enum constant of this type with the specified name.
static MolecularSequence.TYPE[]	MolecularSequence.TYPE.values() Returns an array containing the constants of this enum type, in the order they are declared.

Constructors in org.forester.sequence with parameters of type MolecularSequence.TYPE

Constructor and Description
BasicSequence(String identifier, char[] mol_sequence, MolecularSequence.TYPE type) Only use if you know what you are doing!
BasicSequence(String identifier, String mol_sequence, MolecularSequence.TYPE type) Only use if you know what you are doing!

Uses of MolecularSequence.TYPE in org.forester.util

Methods in org.forester.util that return MolecularSequence.TYPE

Modifier and Type	Method and Description
static MolecularSequence.TYPE	ForesterUtil.guessMolecularSequenceType(String mol_seq)