org.forester.phylogeny.factories

Interface PhylogenyFactory

All Known Implementing Classes:

ParserBasedPhylogenyFactory

public interface PhylogenyFactory

Method Summary

Modifier and Type	Method and Description
Phylogeny[]	create(Object source, Object creator) This must create a Phylogeny from source (e.g.

Method Detail

create

Phylogeny[] create(Object source,
                   Object creator)
            throws IOException

This must create a Phylogeny from source (e.g. an XML file, an alignment, pairwise distances) by using creator (e.g. an XML file parser, an algorithm implementation).

Parameters:

source - a source to create a Phylogeny from

creator - a means to create a Phylogeny

Returns:

a Phylogeny[] based on argument source

Throws:

IOException