Uses of Class
org.forester.phylogeny.data.Confidence

Packages that use Confidence

Package	Description
org.forester.phylogeny
org.forester.phylogeny.data

Uses of Confidence in org.forester.phylogeny

Methods in org.forester.phylogeny that return Confidence

Modifier and Type	Method and Description
Confidence	Phylogeny.getConfidence()

Methods in org.forester.phylogeny with parameters of type Confidence

Modifier and Type	Method and Description
void	Phylogeny.setConfidence(Confidence confidence)

Uses of Confidence in org.forester.phylogeny.data

Methods in org.forester.phylogeny.data that return Confidence

Modifier and Type	Method and Description
Confidence	SequenceRelation.getConfidence()
Confidence	Event.getConfidence()
Confidence	Annotation.getConfidence()
Confidence	BranchData.getConfidence(int index)

Methods in org.forester.phylogeny.data that return types with arguments of type Confidence

Modifier and Type	Method and Description
List<Confidence>	BranchData.getConfidences()

Methods in org.forester.phylogeny.data with parameters of type Confidence

Modifier and Type	Method and Description
void	BranchData.addConfidence(Confidence confidence)
int	Confidence.compareTo(Confidence confidence)
void	SequenceRelation.setConfidence(Confidence confidence)
void	Event.setConfidence(Confidence confidence)
void	Annotation.setConfidence(Confidence confidence)