org.forester.pccx

Class CoverageCalculator

java.lang.Object

org.forester.pccx.CoverageCalculator

public class CoverageCalculator
extends Object

Method Summary

Modifier and Type	Method and Description
Coverage	calculateCoverage(List<Phylogeny> phylogenies, List<String> names, boolean annotate_phylogenies)
static CoverageCalculator	getInstance(CoverageCalculationMethod method, CoverageCalculationOptions options)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

calculateCoverage

public Coverage calculateCoverage(List<Phylogeny> phylogenies,
                                  List<String> names,
                                  boolean annotate_phylogenies)

getInstance

public static CoverageCalculator getInstance(CoverageCalculationMethod method,
                                             CoverageCalculationOptions options)