org.forester.io.parsers.tol

Class TolParser

java.lang.Object

org.forester.io.parsers.tol.TolParser

All Implemented Interfaces:

PhylogenyParser

public class TolParser
extends Object
implements PhylogenyParser

Field Summary

Fields

Modifier and Type	Field and Description
static String	APACHE_FEATURES_VALIDATION_SCHEMA
static String	APACHE_FEATURES_VALIDATION_SCHEMA_FULL
static String	APACHE_PROPERTIES_SCHEMA_EXTERNAL_LOCATION
static String	JAXP_SCHEMA_LANGUAGE
static String	JAXP_SCHEMA_SOURCE
static String	SAX_FEATURES_VALIDATION
static String	W3C_XML_SCHEMA

Constructor Summary

Constructors

Constructor and Description
TolParser()

Method Summary

Modifier and Type	Method and Description
int	getErrorCount()
StringBuffer	getErrorMessages()
String	getName()
int	getWarningCount()
StringBuffer	getWarningMessages()
boolean	isValid()
Phylogeny[]	parse()
void	setSource(Object source)
void	setValidateAgainstSchema(String schema_location)
void	setZippedInputstream(boolean zipped_inputstream)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

JAXP_SCHEMA_LANGUAGE

public static final String JAXP_SCHEMA_LANGUAGE

See Also:

Constant Field Values

W3C_XML_SCHEMA

public static final String W3C_XML_SCHEMA

See Also:

Constant Field Values

JAXP_SCHEMA_SOURCE

public static final String JAXP_SCHEMA_SOURCE

See Also:

Constant Field Values

SAX_FEATURES_VALIDATION

public static final String SAX_FEATURES_VALIDATION

See Also:

Constant Field Values

APACHE_FEATURES_VALIDATION_SCHEMA

public static final String APACHE_FEATURES_VALIDATION_SCHEMA

See Also:

Constant Field Values

APACHE_FEATURES_VALIDATION_SCHEMA_FULL

public static final String APACHE_FEATURES_VALIDATION_SCHEMA_FULL

See Also:

Constant Field Values

APACHE_PROPERTIES_SCHEMA_EXTERNAL_LOCATION

public static final String APACHE_PROPERTIES_SCHEMA_EXTERNAL_LOCATION

See Also:

Constant Field Values

Constructor Detail

TolParser

public TolParser()

Method Detail

getErrorCount

public int getErrorCount()

getErrorMessages

public StringBuffer getErrorMessages()

getWarningCount

public int getWarningCount()

getWarningMessages

public StringBuffer getWarningMessages()

isValid

public boolean isValid()

parse

public Phylogeny[] parse()
                  throws IOException,
                         PhylogenyParserException

Specified by:

parse in interface PhylogenyParser

Throws:

IOException

PhylogenyParserException

setSource

public void setSource(Object source)

Specified by:

setSource in interface PhylogenyParser

setValidateAgainstSchema

public void setValidateAgainstSchema(String schema_location)

setZippedInputstream

public void setZippedInputstream(boolean zipped_inputstream)

getName

public String getName()

Specified by:

getName in interface PhylogenyParser